RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 C14orf80Q86SX3 495 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 LEO1Q8WVC0 666 aaPredicted RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 CORO1BQ9BR76 489 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 MAK16Q9BXY0 300 aaKnown RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 SOWAHBA6NEL2 793 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 C17orf99Q6UX52 265 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
SRRT-216ENST00000618262 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 ERMNQ8TAM6 284 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 FAM76AQ8TAV0 307 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 TRIM47Q96LD4 638 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 SH2D3AQ9BRG2 576 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 PDGFCQ9NRA1 345 aa13.17□□□□□ -0.3
SRRT-216ENST00000618262 AHCYL1O43865 530 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 ITGB5P18084 799 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 RPL13P26373 211 aaKnown RBP13.16□□□□□ -0.3
SRRT-216ENST00000618262 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
SRRT-216ENST00000618262 KRT25Q7Z3Z0 450 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
SRRT-216ENST00000618262 BRD8Q9H0E9 1235 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 LAMA3Q16787 3333 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 POTEMA6NI47 508 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 CEP104O60308 925 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 ELNP15502 786 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 PGM5Q15124 567 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 FAM110CQ1W6H9 321 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 THEMIS2Q5TEJ8 643 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 BRAPQ7Z569 592 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.16□□□□□ -0.32e-8■■□□□ 12.8
SRRT-216ENST00000618262 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 CFAP45Q9UL16 551 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 PRELID1Q9Y255 219 aa13.16□□□□□ -0.3
SRRT-216ENST00000618262 GOLGA6L10A6NI86 522 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 NR3C2P08235 984 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 BCRP11274 1271 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
SRRT-216ENST00000618262 CCNA1P78396 465 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 SLC30A9Q6PML9 568 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 NPLOC4Q8TAT6 608 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 SLC35B4Q969S0 331 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 AASDHPPTQ9NRN7 309 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 WDR37Q9Y2I8 494 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 SPTLC2O15270 562 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 NEMFO60524 1076 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 ATP9AO75110 1047 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 B3GALNT1O75752 331 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 HSD17B4P51659 736 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 PRKCZQ05513 592 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 TRIM32Q13049 653 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
SRRT-216ENST00000618262 IL17AQ16552 155 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 FLRT1Q9NZU1 646 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 PCDHA7Q9UN72 937 aa13.15□□□□□ -0.3
SRRT-216ENST00000618262 MTRF1O75570 445 aaKnown RBP13.14□□□□□ -0.31
SRRT-216ENST00000618262 CSPG5O95196 566 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 FESP07332 822 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
SRRT-216ENST00000618262 CWF19L1Q69YN2 538 aaKnown RBP13.14□□□□□ -0.31
SRRT-216ENST00000618262 PLEKHH3Q7Z736 793 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 ZNF296Q8WUU4 475 aaPredicted RBP13.14□□□□□ -0.31
SRRT-216ENST00000618262 STAMQ92783 540 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 COPS5Q92905 334 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 SCYL1Q96KG9 808 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 BATF3Q9NR55 127 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 ESYT2A0FGR8 921 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 CAMK4Q16566 473 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 ERCC6LQ2NKX8 1250 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 HHIPL1Q96JK4 782 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 TNMDQ9H2S6 317 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 MAFFQ9ULX9 164 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 LSM1O15116 133 aaKnown RBP13.14□□□□□ -0.31
SRRT-216ENST00000618262 FLT3LGP49771 235 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 OAZ1P54368 228 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 SP3Q02447 781 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 CALCRLQ16602 461 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 CLPPQ16740 277 aaPredicted RBP13.14□□□□□ -0.31
SRRT-216ENST00000618262 LY6KQ17RY6 165 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 PPP1R18Q6NYC8 613 aa13.14□□□□□ -0.31
SRRT-216ENST00000618262 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms