RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 USO1O60763 962 aaKnown RBP19.19■□□□□ 0.66
CNOT3-209ENST00000617930 POLR2FP61218 127 aaKnown RBP19.19■□□□□ 0.66
CNOT3-209ENST00000617930 AGPAT3Q9NRZ7 376 aa19.19■□□□□ 0.66
CNOT3-209ENST00000617930 FHOD1Q9Y613 1164 aa19.19■□□□□ 0.66
CNOT3-209ENST00000617930 SORBS3O60504 671 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 PNMA6AP0CW24 399 aaPredicted RBP19.18■□□□□ 0.66
CNOT3-209ENST00000617930 TERF2Q15554 542 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 NFIL3Q16649 462 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 CEP72Q9P209 647 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 WDR64B1ANS9 1081 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 SLC16A3O15427 465 aaKnown RBP19.18■□□□□ 0.66
CNOT3-209ENST00000617930 OSBPP22059 807 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 HUNKP57058 714 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 PSMC5P62195 406 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 KRT76Q01546 638 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 ZNF662Q6ZS27 426 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 ANKRD35Q8N283 1001 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 SENP7Q9BQF6 1050 aa19.18■□□□□ 0.66
CNOT3-209ENST00000617930 AJAP1Q9UKB5 411 aaPredicted RBP19.18■□□□□ 0.66
CNOT3-209ENST00000617930 LCA5LO95447 670 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 AFPP02771 609 aaKnown RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 PON1P27169 355 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 CYLC1P35663 651 aaPredicted RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 JAK3P52333 1124 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 GTF2A2P52657 109 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 DCAF17Q5H9S7 520 aaPredicted RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 GOLGA1Q92805 767 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 CCDC42Q96M95 316 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 EPC1Q9H2F5 836 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 HAUS4Q9H6D7 363 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 EFCC1Q9HA90 598 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 SIX2Q9NPC8 291 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 ZNFX1Q9P2E3 1918 aaKnown RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 PGK2P07205 417 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 CETPP11597 493 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 XRCC5P13010 732 aaKnown RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 RPL13P26373 211 aaKnown RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 KIF11P52732 1056 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 SOX10P56693 466 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 CCDC122Q5T0U0 273 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 ZNF746Q6NUN9 644 aaPredicted RBP19.17■□□□□ 0.66
CNOT3-209ENST00000617930 CACNA2D4Q7Z3S7 1137 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 NLRX1Q86UT6 975 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 FAM133AQ8N9E0 248 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 ZSWIM2Q8NEG5 633 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 GBP3Q9H0R5 595 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 ST7Q9NRC1 585 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 PCDHA10Q9Y5I2 948 aa19.17■□□□□ 0.66
CNOT3-209ENST00000617930 PASKQ96RG2 1323 aa19.16■□□□□ 0.66
CNOT3-209ENST00000617930 SPATA31C2B4DYI2 1134 aa19.16■□□□□ 0.66
CNOT3-209ENST00000617930 ZRANB2O95218 330 aaKnown RBP eCLIP19.16■□□□□ 0.66
CNOT3-209ENST00000617930 PLS3P13797 630 aa19.16■□□□□ 0.66
CNOT3-209ENST00000617930 SFNP31947 248 aa19.16■□□□□ 0.66
CNOT3-209ENST00000617930 KRT83P78385 493 aa19.16■□□□□ 0.66
CNOT3-209ENST00000617930 RASAL3Q86YV0 1011 aa19.16■□□□□ 0.66
CNOT3-209ENST00000617930 K7ENM7 598 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 MAFGO15525 162 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 EPB41P11171 864 aaKnown RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 ALDH5A1P51649 535 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 AMPD2Q01433 879 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 GFPT1Q06210 699 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 CCDC60Q8IWA6 550 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 JAKMIP2Q96AA8 810 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 GABBR1Q9UBS5 961 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 MCM3APO60318 1980 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 UBE4BO95155 1302 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 WDR81Q562E7 1941 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 SEC31AO94979 1220 aaKnown RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 ZBTB48P10074 688 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 CYP2J2P51589 502 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 SP4Q02446 784 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 XKR9Q5GH70 373 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 KLHDC7AQ5VTJ3 777 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 TCERG1LQ5VWI1 586 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 SWSAP1Q6NVH7 229 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 GJB7Q6PEY0 223 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 ANKRD23Q86SG2 305 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 FAM186BQ8IYM0 893 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 ANKRD13CQ8N6S4 541 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 METTL14Q9HCE5 456 aaKnown RBP19.15■□□□□ 0.66
CNOT3-209ENST00000617930 MYO1AQ9UBC5 1043 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 PCDHA13Q9Y5I0 950 aa19.15■□□□□ 0.66
CNOT3-209ENST00000617930 KIF3CO14782 793 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 EDNRBP24530 442 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 PSMC2P35998 433 aaKnown RBP19.14■□□□□ 0.65
CNOT3-209ENST00000617930 VAV2P52735 878 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 ABHD15Q6UXT9 468 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 RSRC2Q7L4I2 434 aaKnown RBP19.14■□□□□ 0.65
CNOT3-209ENST00000617930 SAPCD2Q86UD0 394 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 BSNDQ8WZ55 320 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 SYN2Q92777 582 aaPredicted RBP19.14■□□□□ 0.65
CNOT3-209ENST00000617930 PLCB1Q9NQ66 1216 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 ANKEF1Q9NU02 776 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 LARSQ9P2J5 1176 aaKnown RBP19.14■□□□□ 0.65
CNOT3-209ENST00000617930 FBXO40Q9UH90 709 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms