RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TMTC4Q5T4D3 741 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 FAM160B1Q5W0V3 765 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ZNF564Q8TBZ8 553 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 RAD54LQ92698 747 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 CYFIP2Q96F07 1278 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 PRMT1Q99873 361 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 NXF1Q9UBU9 619 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 LEMD3Q9Y2U8 911 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ZNF711Q9Y462 761 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 hCG_2014768A0A024R1R8 64 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 CHN1P15882 459 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 COASYQ13057 564 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ORC2Q13416 577 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 RASSF3Q86WH2 238 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 RNPC3Q96LT9 517 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 LCMT1Q9UIC8 334 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TTC7AQ9ULT0 858 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ATP10AO60312 1499 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ZNF233A6NK53 670 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 PSMD14O00487 310 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 H2AFXP16104 143 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 PSMA2P25787 234 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 KLC3Q6P597 504 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 TRPM8Q7Z2W7 1104 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 SFR1Q86XK3 245 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 ATP11CQ8NB49 1132 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 FBXL13Q8NEE6 735 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 SGSM3Q96HU1 749 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 SPC25Q9HBM1 224 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 SLC40A1Q9NP59 571 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 NEDD4P46934 1319 aa11.38□□□□□ -0.59
CLTCL1-209ENST00000617103 SSU72P8A0A1W2PR75 194 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 POTEMA6NI47 508 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 LPXNO60711 386 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 DNAJC6O75061 913 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 KRT14P02533 472 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 KITP10721 976 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 CD58P19256 250 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SERPINB4P48594 390 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 MRPS35P82673 323 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 USP17L1Q7RTZ2 530 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 VPS39Q96JC1 886 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 WWP1Q9H0M0 922 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 ZWILCHQ9H900 591 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 DISP1Q96F81 1524 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 GOLGA8IPA6NC78 632 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 GOLGA8JA6NMD2 632 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 H0YIN7 160 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 FOXP2O15409 715 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 CHEK2O96017 543 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 FTLP02792 175 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 ATP2C1P98194 919 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SLC12A1Q13621 1099 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 DRAP1Q14919 205 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 NCAPHQ15003 741 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 KNOP1Q1ED39 458 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 KIAA1755Q5JYT7 1200 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 HP1BP3Q5SSJ5 553 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SGMS1Q86VZ5 419 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 KIAA0825Q8IV33 1275 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 NUDCD3Q8IVD9 361 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 BBS5Q8N3I7 341 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 NOA1Q8NC60 698 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SEC31BQ9NQW1 1179 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 GGT7Q9UJ14 662 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SNX5Q9Y5X3 404 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 PRDM15P57071 1507 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SORBS3O60504 671 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 MED21Q13503 144 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 MORF4L2Q15014 288 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 PPM1NQ8N819 430 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 AS3MTQ9HBK9 375 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 FBXO2Q9UK22 296 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 CCT8L1PA6NM43 557 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 XPOTO43592 962 aaKnown RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 BMP3P12645 472 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SEC24CP53992 1094 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 CCDC92Q53HC0 331 aaPredicted RBP11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 NLRP10Q86W26 655 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 TMEM35BQ8NCS4 154 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 ZIM3Q96PE6 472 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 NUP85Q9BW27 656 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 EHD2Q9NZN4 543 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 SUN2Q9UH99 717 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 GJA3Q9Y6H8 435 aa11.37□□□□□ -0.59
CLTCL1-209ENST00000617103 CDH16O75309 829 aa11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 PDIA2Q13087 525 aaKnown RBP11.36□□□□□ -0.59
CLTCL1-209ENST00000617103 SPICE1Q8N0Z3 855 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms