RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SCFD1Q8WVM8 642 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 FAM86B1E9PN63 330 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 FAM86B2P0C5J1 330 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 ATF7P17544 494 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 IREB2P48200 963 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 CYFIP1Q7L576 1253 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 MSTO1Q9BUK6 570 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 NSRP1Q9H0G5 558 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 SLC16A3O15427 465 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 THAP12O43422 761 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 KLRC4O43908 158 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 VIMP08670 466 aaKnown RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 PLTPP55058 493 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 APBB1IPQ7Z5R6 666 aaPredicted RBP14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 ZNF280CQ8ND82 737 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 TAAR1Q96RJ0 339 aa14.26□□□□□ -0.13
PPP4R3B-206ENST00000616407 A6NNZ2 444 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 SOX5P35711 763 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 FMO5P49326 533 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 NPEPPSP55786 919 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 SF3A3Q12874 501 aaKnown RBP eCLIP14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 TUBB8Q3ZCM7 444 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 RHOT2Q8IXI1 618 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 FERMT1Q9BQL6 677 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 CAPS2Q9BXY5 557 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 PPANQ9NQ55 473 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 PARP2Q9UGN5 583 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 NPY5RQ15761 445 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 CCDC121Q6ZUS5 278 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 RPUSD2Q8IZ73 545 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 LRRN4CLQ8ND94 238 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 UNC45AQ9H3U1 944 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 CD58P19256 250 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 ADCY8P40145 1251 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 YWHAEP62258 255 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 GPR162Q16538 588 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 MS4A14Q96JA4 679 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 MTRQ99707 1265 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 SMARCAL1Q9NZC9 954 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 ADAM21Q9UKJ8 722 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 CASP4P49662 377 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 KAZNQ674X7 775 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 CCDC91Q7Z6B0 441 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 BCAS4Q8TDM0 211 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 LRRC1Q9BTT6 524 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 TEX13BQ9BXU2 312 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 NXF1Q9UBU9 619 aaKnown RBP14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 ATP8A1Q9Y2Q0 1164 aa14.25□□□□□ -0.13
PPP4R3B-206ENST00000616407 FTLP02792 175 aaPredicted RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 ICAM1P05362 532 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 FIGNQ5HY92 759 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 EMBQ6PCB8 327 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 GLIS3Q8NEA6 775 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 HAS1Q92839 578 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 NLRP4Q96MN2 994 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 PPP1R16BQ96T49 567 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 RGS16O15492 202 aaPredicted RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 SNX1Q13596 522 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 Q4G0T1 1027 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 TMEM119Q4V9L6 283 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 KRT39Q6A163 491 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 ANKS4BQ8N8V4 417 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 MKL1Q969V6 931 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 SLC9A2Q9UBY0 812 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 FBXO40Q9UH90 709 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 E7EVH7 732 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 EVI5O60447 810 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 CTNND1O60716 968 aaKnown RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 KLRC1P26715 233 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 GABPAQ06546 454 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 BFSP1Q12934 665 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 TFDP1Q14186 410 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 GJB7Q6PEY0 223 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 SLC16A10Q8TF71 515 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 DDX47Q9H0S4 455 aaKnown RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 JPH1Q9HDC5 661 aaPredicted RBP14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 ZNF302Q9NR11 478 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 FAM114A2Q9NRY5 505 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 RAB20Q9NX57 234 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 HSPBP1Q9NZL4 362 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 HACL1Q9UJ83 578 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 NID2Q14112 1375 aa14.24□□□□□ -0.13
PPP4R3B-206ENST00000616407 NFIBO00712 420 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 ADAMTS3O15072 1205 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 OSBPP22059 807 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 DHX9Q08211 1270 aaKnown RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 ZNF211Q13398 564 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 KLHDC7AQ5VTJ3 777 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 DPP9Q86TI2 863 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 ZKSCAN4Q969J2 545 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 ADPGKQ9BRR6 497 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 POLR3FQ9H1D9 316 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 KCND2Q9NZV8 630 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms