RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 KCNA1Q09470 495 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 COL23A1Q86Y22 540 aaPredicted RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 PAIP2Q9BPZ3 127 aaKnown RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.09□□□□□ -1.432e-6■□□□□ 9.9
SYNCRIP-204ENST00000616122 PACSIN1Q9BY11 444 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 OLFML3Q9NRN5 406 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 SCAF8Q9UPN6 1271 aaKnown RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 IKBKGQ9Y6K9 419 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 RIMS1Q86UR5 1692 aaKnown RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 ANXA13P27216 316 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLCO1A2P46721 670 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 TRPC3Q13507 836 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 PPP2R5AQ15172 486 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 CLUL1Q15846 466 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 KRT39Q6A163 491 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 BANK1Q8NDB2 785 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.09□□□□□ -1.434e-6■■■■■ 39.4
SYNCRIP-204ENST00000616122 TAF1DQ9H5J8 278 aaPredicted RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 KMT5AQ9NQR1 393 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF277Q9NRM2 450 aaPredicted RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 ALG6Q9Y672 507 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 MED1Q15648 1581 aaPredicted RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF233A6NK53 670 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 H0YCG3 227 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 HSPA1LP34931 641 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 PDE6CP51160 858 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 DPH6Q7L8W6 267 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 DNAAF5Q86Y56 855 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 RTKN2Q8IZC4 609 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 CACNA2D3Q8IZS8 1091 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 KCTD17Q8N5Z5 321 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 STK33Q9BYT3 514 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 AZI2Q9H6S1 392 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 AGPAT3Q9NRZ7 376 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF148Q9UQR1 794 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 FAM169AQ9Y6X4 670 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 CACNA1FO60840 1977 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 DENND3A2RUS2 1198 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 FOXN3O00409 490 aaPredicted RBP6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 POLRMTO00411 1230 aaKnown RBP6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 SNHG28P0DPA3 235 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 ALCAMQ13740 583 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 MIIPQ5JXC2 388 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 AMIGO3Q86WK7 504 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 BAP1Q92560 729 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 GMCL1Q96IK5 515 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 NSRP1Q9H0G5 558 aaKnown RBP6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 RAVER2Q9HCJ3 691 aaKnown RBP6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 KCNH7Q9NS40 1196 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 PSD3Q9NYI0 1048 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 CNOT8Q9UFF9 292 aaKnown RBP6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 CAPN7Q9Y6W3 813 aa6.09□□□□□ -1.44
SYNCRIP-204ENST00000616122 RPS6P62753 249 aaKnown RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 BFSP1Q12934 665 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 DACT2Q5SW24 774 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 USP38Q8NB14 1042 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 FBXL13Q8NEE6 735 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 ARL8AQ96BM9 186 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 FAM81BQ96LP2 452 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 POLR3CQ9BUI4 534 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 RUSC1Q9BVN2 902 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 TMEM39BQ9GZU3 492 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 SLITRK6Q9H5Y7 841 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 INTS9Q9NV88 658 aaKnown RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 TMX2Q9Y320 296 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 PCDHA10Q9Y5I2 948 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZHX2Q9Y6X8 837 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 PASKQ96RG2 1323 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 NOP56O00567 594 aaKnown RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 MEIS2O14770 477 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 GLI1P08151 1106 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 KRT15P19012 456 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 SOX5P35711 763 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 ADCY8P40145 1251 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 DR1Q01658 176 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 MUM1L1Q5H9M0 696 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 RNF207Q6ZRF8 634 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 ZNF571Q7Z3V5 609 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 SAAL1Q96ER3 474 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 F5P12259 2224 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 NID2Q14112 1375 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 HMGB1P1B2RPK0 211 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 EML1O00423 815 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 HIP1RO75146 1068 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 FECHP22830 423 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 RWDD2BP57060 319 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 BRDTQ58F21 947 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 AIPL1Q9NZN9 384 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 FBXL5Q9UKA1 691 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 HPCAL4Q9UM19 191 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 MYBL2P10244 700 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 TMOD1P28289 359 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 SEC24CP53992 1094 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 POLGP54098 1239 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 PSMC5P62195 406 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 GPC5P78333 572 aa6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 BAATQ14032 418 aaPredicted RBP6.08□□□□□ -1.44
SYNCRIP-204ENST00000616122 MTERF2Q49AM1 385 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms