RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ATMINO43313 823 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 IREB2P48200 963 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 ZBTB16Q05516 673 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 COG2Q14746 738 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 INTS8Q75QN2 995 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 GRK7Q8WTQ7 553 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 LRRC1Q9BTT6 524 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 TUFT1Q9NNX1 390 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 ZNF148Q9UQR1 794 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 COMMD10Q9Y6G5 202 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 COL14A1Q05707 1796 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 INPP5BP32019 993 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 GMPSP49915 693 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 BAATQ14032 418 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 PPP2R5AQ15172 486 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 SLC15A2Q16348 729 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 DEFB132Q7Z7B7 95 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 XXYLT1Q8NBI6 393 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 RASSF4Q9H2L5 321 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 PASKQ96RG2 1323 aa9.64□□□□□ -0.87
PDLIM5-222ENST00000615540 PIK3R2O00459 728 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 SOX5P35711 763 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 YWHAEP62258 255 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 PSMC6P62333 389 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 BFSP1Q12934 665 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 CLUL1Q15846 466 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 NBPF9Q3BBW0 867 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 C10orf76Q5T2E6 689 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ANKRD7Q92527 254 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 NUDT12Q9BQG2 462 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 MED4Q9NPJ6 270 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 KLHL11Q9NVR0 708 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 HSPBP1Q9NZL4 362 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 MYO1FO00160 1098 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 CYP26A1O43174 497 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 DGKZQ13574 1117 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 RNF181Q9P0P0 153 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 STIM2Q9P246 746 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 DAAM1Q9Y4D1 1078 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 FAM169AQ9Y6X4 670 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 POC1B-GALNT4F8VUJ3 575 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 K7ERI5 159 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 CDO1Q16878 200 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 TMEM270Q6UE05 265 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 FRMD5Q7Z6J6 570 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 PALM2Q8IXS6 379 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 BCAS4Q8TDM0 211 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 AKT1S1Q96B36 256 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 TBC1D22BQ9NU19 505 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 CCDC151A5D8V7 595 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ENTPD3O75355 529 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 IFNAR2P48551 515 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 SLC8A3P57103 927 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 PSMC5P62195 406 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 HERVK_113P62684 666 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 SLC30A5Q8TAD4 765 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 GDAP1Q8TB36 358 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 NSUN6Q8TEA1 469 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 NOC2LQ9Y3T9 749 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ZNF233A6NK53 670 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ECEL1O95672 775 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ARP10275 920 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 EPHA7Q15375 998 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 B4GALNT4Q76KP1 1039 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ELOA2Q8IYF1 753 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ZDHHC15Q96MV8 337 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 DDX47Q9H0S4 455 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 ROBO1Q9Y6N7 1651 aa9.63□□□□□ -0.87
PDLIM5-222ENST00000615540 F5H423 210 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 M0QZ92 97 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 GAS8O95995 478 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 FTLP02792 175 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 HHATQ5VTY9 493 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 CYP2W1Q8TAV3 490 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 FAM49AQ9H0Q0 323 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 ANKRD65E5RJM6 399 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 MAP3K9P80192 1104 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 KIAA0895Q8NCT3 520 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 MAIP1Q8WWC4 291 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 VCPKMTQ9H867 229 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 TXNDC16Q9P2K2 825 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 SLC9A2Q9UBY0 812 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 TMED2Q15363 201 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 ARMC9Q7Z3E5 817 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 HAUS6Q7Z4H7 955 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 FAM151AQ8WW52 585 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 MMP19Q99542 508 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 ANAPC7Q9UJX3 599 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 GOLGB1Q14789 3259 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 SARSP49591 514 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 SOX10P56693 466 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 HP1BP3Q5SSJ5 553 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 CERS5Q8N5B7 392 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 FAM114A2Q9NRY5 505 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 NOVA2Q9UNW9 492 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 SNX24Q9Y343 169 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 MYL3P08590 195 aa9.62□□□□□ -0.87
PDLIM5-222ENST00000615540 BMP6P22004 513 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms