RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 ZNF410Q86VK4 478 aa28.26■■■□□ 2.11
SURF1-205ENST00000615505 ZNF668Q96K58 619 aaPredicted RBP28.26■■■□□ 2.11
SURF1-205ENST00000615505 MTRQ99707 1265 aa28.26■■■□□ 2.11
SURF1-205ENST00000615505 GCOM2Q9BZD3 368 aaPredicted RBP28.26■■■□□ 2.11
SURF1-205ENST00000615505 INSL6Q9Y581 213 aa28.26■■■□□ 2.11
SURF1-205ENST00000615505 LOXHD1Q8IVV2 1947 aa28.26■■■□□ 2.11
SURF1-205ENST00000615505 GBF1Q92538 1859 aa28.25■■■□□ 2.11
SURF1-205ENST00000615505 STX6O43752 255 aa28.25■■■□□ 2.11
SURF1-205ENST00000615505 DGAT1O75907 488 aa28.25■■■□□ 2.11
SURF1-205ENST00000615505 DARSP14868 501 aaKnown RBP28.25■■■□□ 2.11
SURF1-205ENST00000615505 RARRES1P49788 294 aa28.25■■■□□ 2.11
SURF1-205ENST00000615505 FAM228AQ86W67 206 aa28.25■■■□□ 2.11
SURF1-205ENST00000615505 PSPC1Q8WXF1 523 aaKnown RBP28.25■■■□□ 2.11
SURF1-205ENST00000615505 TMEM143Q96AN5 459 aa28.25■■■□□ 2.11
SURF1-205ENST00000615505 TSPYL2Q9H2G4 693 aaPredicted RBP28.25■■■□□ 2.11
SURF1-205ENST00000615505 BMP2KQ9NSY1 1161 aaPredicted RBP28.25■■■□□ 2.11
SURF1-205ENST00000615505 DBR1Q9UK59 544 aaKnown RBP28.25■■■□□ 2.11
SURF1-205ENST00000615505 PTPRSQ13332 1948 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 A0A087WWV3 80 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 GRIN2CQ14957 1233 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 IL17AQ16552 155 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 KRT79Q5XKE5 535 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 RTN4RL1Q86UN2 441 aaPredicted RBP28.24■■■□□ 2.11
SURF1-205ENST00000615505 SNX29Q8TEQ0 813 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 GUCD1Q96NT3 240 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 INO80BQ9C086 356 aaPredicted RBP28.24■■■□□ 2.11
SURF1-205ENST00000615505 TMX1Q9H3N1 280 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 ATP6V0A4Q9HBG4 840 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 COL4A3BPQ9Y5P4 624 aa28.24■■■□□ 2.11
SURF1-205ENST00000615505 A0A087WZ62 844 aa28.23■■■□□ 2.11
SURF1-205ENST00000615505 ASAP2O43150 1006 aa28.23■■■□□ 2.11
SURF1-205ENST00000615505 POTEGQ6S5H5 508 aa28.23■■■□□ 2.11
SURF1-205ENST00000615505 PRPF31Q8WWY3 499 aaKnown RBP28.23■■■□□ 2.11
SURF1-205ENST00000615505 CDX2Q99626 313 aaPredicted RBP28.23■■■□□ 2.11
SURF1-205ENST00000615505 FDXACB1Q9BRP7 624 aaPredicted RBP28.23■■■□□ 2.11
SURF1-205ENST00000615505 MTMR6Q9Y217 621 aa28.23■■■□□ 2.11
SURF1-205ENST00000615505 DENND3A2RUS2 1198 aa28.22■■■□□ 2.11
SURF1-205ENST00000615505 PDIA4P13667 645 aaKnown RBP28.22■■■□□ 2.11
SURF1-205ENST00000615505 HTRA4P83105 476 aaPredicted RBP28.22■■■□□ 2.11
SURF1-205ENST00000615505 RESTQ13127 1097 aa28.22■■■□□ 2.11
SURF1-205ENST00000615505 LINC01599Q8WXQ3 324 aa28.22■■■□□ 2.11
SURF1-205ENST00000615505 NLRP4Q96MN2 994 aa28.22■■■□□ 2.11
SURF1-205ENST00000615505 YME1L1Q96TA2 773 aa28.22■■■□□ 2.11
SURF1-205ENST00000615505 ZSCAN16Q9H4T2 348 aaPredicted RBP28.22■■■□□ 2.11
SURF1-205ENST00000615505 RNF216Q9NWF9 866 aaPredicted RBP28.22■■■□□ 2.11
SURF1-205ENST00000615505 VWA3AA6NCI4 1184 aa28.21■■■□□ 2.11
SURF1-205ENST00000615505 TAP1Q03518 808 aa28.21■■■□□ 2.11
SURF1-205ENST00000615505 SF3A1Q15459 793 aaKnown RBP28.21■■■□□ 2.11
SURF1-205ENST00000615505 KSR1Q8IVT5 923 aa28.21■■■□□ 2.11
SURF1-205ENST00000615505 ADAM2Q99965 735 aa28.21■■■□□ 2.11
SURF1-205ENST00000615505 XPNPEP1Q9NQW7 623 aa28.21■■■□□ 2.11
SURF1-205ENST00000615505 C1orf112Q9NSG2 853 aa28.21■■■□□ 2.11
SURF1-205ENST00000615505 KIAA1024Q9UPX6 916 aa28.21■■■□□ 2.11
SURF1-205ENST00000615505 LCHNA4D1U4 455 aa28.2■■■□□ 2.1
SURF1-205ENST00000615505 ARHGEF35A5YM69 484 aa28.2■■■□□ 2.1
SURF1-205ENST00000615505 STAG3L1P0CL83 205 aa28.2■■■□□ 2.1
SURF1-205ENST00000615505 ZSCAN20P17040 1043 aaPredicted RBP28.2■■■□□ 2.1
SURF1-205ENST00000615505 LAMTOR4Q0VGL1 99 aa28.2■■■□□ 2.1
SURF1-205ENST00000615505 MXD4Q14582 209 aaPredicted RBP28.2■■■□□ 2.1
SURF1-205ENST00000615505 RGS18Q9NS28 235 aa28.2■■■□□ 2.1
SURF1-205ENST00000615505 STXBP5LQ9Y2K9 1186 aa28.2■■■□□ 2.1
SURF1-205ENST00000615505 PP2D1A8MPX8 630 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 USO1O60763 962 aaKnown RBP28.19■■■□□ 2.1
SURF1-205ENST00000615505 SRGAP2CP0DJJ0 459 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 SFPQP23246 707 aaKnown RBP eCLIP28.19■■■□□ 2.1
SURF1-205ENST00000615505 ECM1Q16610 540 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 SLC24A5Q71RS6 500 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 NPAS4Q8IUM7 802 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 MYLIPQ8WY64 445 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 PRDM12Q9H4Q4 367 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 DDX19AQ9NUU7 478 aaKnown RBP28.19■■■□□ 2.1
SURF1-205ENST00000615505 LRFN2Q9ULH4 789 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 ARID2Q68CP9 1835 aa28.19■■■□□ 2.1
SURF1-205ENST00000615505 MGEA5O60502 916 aa28.18■■■□□ 2.1
SURF1-205ENST00000615505 CDC25AP30304 524 aa28.18■■■□□ 2.1
SURF1-205ENST00000615505 SARSP49591 514 aaKnown RBP28.18■■■□□ 2.1
SURF1-205ENST00000615505 MCPH1Q8NEM0 835 aa28.18■■■□□ 2.1
SURF1-205ENST00000615505 IFT122Q9HBG6 1241 aa28.18■■■□□ 2.1
SURF1-205ENST00000615505 DNM3Q9UQ16 869 aa28.18■■■□□ 2.1
SURF1-205ENST00000615505 CSDE1O75534 798 aaKnown RBP28.17■■■□□ 2.1
SURF1-205ENST00000615505 FGFR4P22455 802 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 TFDP1Q14186 410 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 DSC3Q14574 896 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 PADI6Q6TGC4 694 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 SRGAP1Q7Z6B7 1085 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 RNF149Q8NC42 400 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 SP7Q8TDD2 431 aaPredicted RBP28.17■■■□□ 2.1
SURF1-205ENST00000615505 AK8Q96MA6 479 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 GAS2L1Q99501 681 aaPredicted RBP28.17■■■□□ 2.1
SURF1-205ENST00000615505 PCDHB7Q9Y5E2 793 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 TTC3P53804 2025 aa28.17■■■□□ 2.1
SURF1-205ENST00000615505 LINC01553A4QN01 128 aa28.16■■■□□ 2.1
SURF1-205ENST00000615505 ARHGEF15O94989 841 aa28.16■■■□□ 2.1
SURF1-205ENST00000615505 ARL2P36404 184 aa28.16■■■□□ 2.1
SURF1-205ENST00000615505 SPRYD3Q8NCJ5 442 aa28.16■■■□□ 2.1
SURF1-205ENST00000615505 TGS1Q96RS0 853 aaKnown RBP28.16■■■□□ 2.1
SURF1-205ENST00000615505 MMTAG2Q9BU76 263 aaKnown RBP28.16■■■□□ 2.1
SURF1-205ENST00000615505 BHMT2Q9H2M3 363 aa28.16■■■□□ 2.1
SURF1-205ENST00000615505 CERS4Q9HA82 394 aa28.16■■■□□ 2.1
SURF1-205ENST00000615505 CHST12Q9NRB3 414 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms