RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 AMFRQ9UKV5 643 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 BLOC1S6Q9UL45 172 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 PTPN22Q9Y2R2 807 aa11.18□□□□□ -0.62
TNFAIP3-208ENST00000615468 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 HNRNPCP07910 306 aaKnown RBP eCLIP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 BRAFP15056 766 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 MYBPC3Q14896 1274 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 GALNTL6Q49A17 601 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 CFAP157Q5JU67 520 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 HGSNATQ68CP4 663 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 CROCCP2Q86T23 111 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 SCG3Q8WXD2 468 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TRAPPC9Q96Q05 1148 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TRIM9Q9C026 710 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 MYLK2Q9H1R3 596 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TBC1D7Q9P0N9 293 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 ATXN10Q9UBB4 475 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 GNAZP19086 355 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 ABCB4P21439 1286 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TMED1Q13445 227 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 PLS1Q14651 629 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 C1QTNF12Q5T7M4 302 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 INTS5Q6P9B9 1019 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 SDCCAG8Q86SQ7 713 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 VPS36Q86VN1 386 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 RBM12BQ8IXT5 1001 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.17□□□□□ -0.623e-6■■■■□ 21.9
TNFAIP3-208ENST00000615468 WDR66Q8TBY9 1149 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 ASAP3Q8TDY4 903 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 CCDC97Q96F63 343 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 ERP44Q9BS26 406 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TBC1D10AQ9BXI6 508 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 PHACTR1Q9C0D0 580 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 CEP72Q9P209 647 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 HNRNPRO43390 633 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TLR2O60603 784 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 OPHN1O60890 802 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 CBX6O95503 412 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 CCNG1P51959 295 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TNIP1Q15025 636 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 COL23A1Q86Y22 540 aaPredicted RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 SCYL3Q8IZE3 742 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 FBXO41Q8TF61 875 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 U2AF1L4Q8WU68 220 aaKnown RBP11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 MCUR1Q96AQ8 359 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TMEM60Q9H2L4 133 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 TMEM59LQ9UK28 342 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 NR2E1Q9Y466 385 aa11.17□□□□□ -0.62
TNFAIP3-208ENST00000615468 MAGEA13PA6NCF6 341 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 O00370 1275 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 GH1P01241 217 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 GYG1P46976 350 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 USP46P62068 366 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 MAP7Q14244 749 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 ARL6IP4Q66PJ3 421 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 LCA5Q86VQ0 697 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 NELFCDQ8IXH7 590 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 CALML4Q96GE6 196 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 DCLRE1BQ9H816 532 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZWILCHQ9H900 591 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 TFCP2L1Q9NZI6 479 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 SPATA31A5Q5VU36 1347 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 SPATA31A7Q8IWB4 1347 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 TMEM110-MUSTN1A8MSY1 372 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 CAPN9O14815 690 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 MAP3K7O43318 606 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 H2AFZP0C0S5 128 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 CCNFP41002 786 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 MAGEA10P43363 369 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 ASTE1Q2TB18 679 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 H2AFVQ71UI9 128 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 SRRM1Q8IYB3 904 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 VPS52Q8N1B4 723 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 SDR42E1Q8WUS8 393 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 KIAA1683Q9H0B3 1180 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 NT5C3AQ9H0P0 336 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 E7ENQ6 273 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZNF189O75820 626 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 CIAO1O76071 339 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 SCG2P13521 617 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 PLCG2P16885 1265 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 GM2AP17900 193 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 LETM2Q2VYF4 491 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 KIAA1755Q5JYT7 1200 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 SV2BQ7L1I2 683 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 EXOC3L1Q86VI1 746 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 ECHDC2Q86YB7 292 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 TBC1D16Q8TBP0 767 aa11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 UTP4Q969X6 686 aaKnown RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
TNFAIP3-208ENST00000615468 MYH7P12883 1935 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms