RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 KCNN1Q92952 543 aa11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GJA10Q969M2 543 aa11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 ALS2CR12Q96Q35 445 aa11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 NACC1Q96RE7 527 aa11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GGT7Q9UJ14 662 aa11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 DBR1Q9UK59 544 aaKnown RBP11.84□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 GRID2IPA4D2P6 1211 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 AGPSO00116 658 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 EML1O00423 815 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 KCNH2Q12809 1159 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CFAP58Q5T655 872 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 IRF2BP2Q7Z5L9 587 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 VTI1AQ96AJ9 217 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CALR3Q96L12 384 aaKnown RBP11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.83□□□□□ -0.516e-10■■□□□ 12.3
SENP3-EIF4A1-201ENST00000614237 GOLPH3Q9H4A6 298 aa11.83□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 A0A0A6YYK5 440 aaPredicted RBP11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NPHP3-ACAD11A0A0J9YXS1 232 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 KLHDC7AQ5VTJ3 777 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 FTCDO95954 541 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ASNSP08243 561 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CCDC172P0C7W6 258 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RFX1P22670 979 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 USP8P40818 1118 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MAGEA1P43355 309 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NPEPPSP55786 919 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CEP85LQ5SZL2 805 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 C8orf74Q6P047 294 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CCNI2Q6ZMN8 369 aaPredicted RBP11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 EIF1ADQ8N9N8 165 aaKnown RBP11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TACO1Q9BSH4 297 aaKnown RBP11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CCDC113Q9H0I3 377 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 EPB41L5Q9HCM4 733 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 BAIAP2L1Q9UHR4 511 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 HYOU1Q9Y4L1 999 aa11.83□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 WDR46O15213 610 aaKnown RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PRPF6O94906 941 aaKnown RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 UPP2O95045 317 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NR2F2P24468 414 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TMOD1P28289 359 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ECE1P42892 770 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CASP5P51878 434 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TCEAL1Q15170 157 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 STXBP4Q6ZWJ1 553 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ADAT2Q7Z6V5 191 aaKnown RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 OGFOD1Q8N543 542 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RUSC1Q9BVN2 902 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SIX2Q9NPC8 291 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TLDC2A0PJX2 215 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 FAM153BP0C7A2 387 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RPS12P25398 132 aaKnown RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CLNS1AP54105 237 aaKnown RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TGFB2P61812 414 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 FAM153CQ494X1 144 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 XRRA1Q6P2D8 792 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ZNF720Q7Z2F6 126 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CACNA2D4Q7Z3S7 1137 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RPAINQ86UA6 219 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 MCF2L2Q86YR7 1114 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 ACER1Q8TDN7 264 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CABS1Q96KC9 395 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RNPC3Q96LT9 517 aaKnown RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NOX5Q96PH1 765 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 LSM14BQ9BX40 385 aaKnown RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 KIAA1683Q9H0B3 1180 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 FAM153AQ9UHL3 310 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CAPN6Q9Y6Q1 641 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RLFQ13129 1914 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PON1P27169 355 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PNMA8AQ86V59 439 aaPredicted RBP11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SLC17A8Q8NDX2 589 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SLC35C1Q96A29 364 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 UBIAD1Q9Y5Z9 338 aa11.82□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PHIPQ8WWQ0 1821 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 C21orf2O43822 256 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 NR3C1P04150 777 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PAX7P23759 505 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PAFAH1B1P43034 410 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CARSP49589 748 aaKnown RBP11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 RASSF7Q02833 373 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 USH1GQ495M9 461 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 PCNX4Q63HM2 1172 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 SMYD5Q6GMV2 418 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 TAX1BP1Q86VP1 789 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 CEP83Q9Y592 693 aa11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 EIF3HO15372 352 aaKnown RBP eCLIP11.81□□□□□ -0.52
SENP3-EIF4A1-201ENST00000614237 KRT18P05783 430 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms