RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 UBA7P41226 1012 aa14.29□□□□□ -0.12
CCL4-201ENST00000613947 NME8Q8N427 588 aa14.29□□□□□ -0.12
CCL4-201ENST00000613947 SLC7A3Q8WY07 619 aa14.29□□□□□ -0.12
CCL4-201ENST00000613947 EPSTI1Q96J88 318 aa14.29□□□□□ -0.12
CCL4-201ENST00000613947 PNMA5Q96PV4 448 aa14.29□□□□□ -0.12
CCL4-201ENST00000613947 PLIN2Q99541 437 aa14.29□□□□□ -0.12
CCL4-201ENST00000613947 OSBPL7Q9BZF2 842 aa14.29□□□□□ -0.12
CCL4-201ENST00000613947 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
CCL4-201ENST00000613947 DHX33Q9H6R0 707 aaKnown RBP14.29□□□□□ -0.12
CCL4-201ENST00000613947 DBR1Q9UK59 544 aaKnown RBP14.29□□□□□ -0.12
CCL4-201ENST00000613947 TCHHQ07283 1943 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 NBNO60934 754 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 PPP6R2O75170 966 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 VTNP04004 478 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 RPLP2P05387 115 aaKnown RBP14.28□□□□□ -0.12
CCL4-201ENST00000613947 TMOD1P28289 359 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 POLGP54098 1239 aaPredicted RBP14.28□□□□□ -0.12
CCL4-201ENST00000613947 MRPS6P82932 125 aaKnown RBP14.28□□□□□ -0.12
CCL4-201ENST00000613947 MGAT3Q09327 533 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 GRB10Q13322 594 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCL4-201ENST00000613947 SYCP1Q15431 976 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 FAM26DQ5JW98 314 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 HYIQ5T013 277 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 IER5Q5VY09 327 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 KCNK18Q7Z418 384 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 CABP7Q86V35 215 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 CCDC43Q96MW1 224 aaKnown RBP14.28□□□□□ -0.12
CCL4-201ENST00000613947 PRO3102Q9H379 93 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 IL23AQ9NPF7 189 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 AKT3Q9Y243 479 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 PPME1Q9Y570 386 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
CCL4-201ENST00000613947 E9PMD0 336 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 RFC2P35250 354 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 RFC5P40937 340 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 DNTTIP2Q5QJE6 756 aaKnown RBP14.27□□□□□ -0.12
CCL4-201ENST00000613947 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 KCNG4Q8TDN1 519 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.12
CCL4-201ENST00000613947 PPP1R16BQ96T49 567 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 BHMT2Q9H2M3 363 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 CDHR5Q9HBB8 845 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 RCOR1Q9UKL0 485 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 DNM3Q9UQ16 869 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 GINS2Q9Y248 185 aa14.27□□□□□ -0.12
CCL4-201ENST00000613947 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 DGAT1O75907 488 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.13
CCL4-201ENST00000613947 BMP8BP34820 402 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 DNM2P50570 870 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 KRT85P78386 507 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 EMC2Q15006 297 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 KARSQ15046 597 aaKnown RBP14.27□□□□□ -0.13
CCL4-201ENST00000613947 KIZQ2M2Z5 673 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 ZNF365Q70YC5 407 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 EXOC8Q8IYI6 725 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
CCL4-201ENST00000613947 TMEM143Q96AN5 459 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 JPH2Q9BR39 696 aaPredicted RBP14.27□□□□□ -0.13
CCL4-201ENST00000613947 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.27□□□□□ -0.13
CCL4-201ENST00000613947 CELF4Q9BZC1 486 aaKnown RBP14.27□□□□□ -0.13
CCL4-201ENST00000613947 CCSER1Q9C0I3 900 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 NT5C3AQ9H0P0 336 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 XPNPEP1Q9NQW7 623 aa14.27□□□□□ -0.13
CCL4-201ENST00000613947 SUCLA2Q9P2R7 463 aaPredicted RBP14.27□□□□□ -0.13
CCL4-201ENST00000613947 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
CCL4-201ENST00000613947 TANC1Q9C0D5 1861 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 ARHGEF35A5YM69 484 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 USO1O60763 962 aaKnown RBP14.26□□□□□ -0.13
CCL4-201ENST00000613947 GPR32O75388 356 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 EYA4O95677 639 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 CXCL10P02778 98 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 NLRP11P59045 1033 aaKnown RBP14.26□□□□□ -0.13
CCL4-201ENST00000613947 TMEM119Q4V9L6 283 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 C9orf50Q5SZB4 431 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 AXDND1Q5T1B0 1012 aaPredicted RBP14.26□□□□□ -0.13
CCL4-201ENST00000613947 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 LEO1Q8WVC0 666 aaPredicted RBP14.26□□□□□ -0.13
CCL4-201ENST00000613947 ANKRD7Q92527 254 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 CALML4Q96GE6 196 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 ZNF668Q96K58 619 aaPredicted RBP14.26□□□□□ -0.13
CCL4-201ENST00000613947 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 TRPV2Q9Y5S1 764 aa14.26□□□□□ -0.13
CCL4-201ENST00000613947 ARID2Q68CP9 1835 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 M0QZ92 97 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 GHRP10912 638 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 PLCG1P19174 1290 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 ME1P48163 572 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 FBXO47Q5MNV8 452 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 PADI6Q6TGC4 694 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 MAEAQ7L5Y9 396 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 OTOP2Q7RTS6 562 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 RHPN2Q8IUC4 686 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 KSR1Q8IVT5 923 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 RNF214Q8ND24 703 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 RASSF8Q8NHQ8 419 aa14.25□□□□□ -0.13
CCL4-201ENST00000613947 SPATA32Q96LK8 384 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms