RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 KSR1Q8IVT5 923 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 IKZF4Q9H2S9 585 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 C17orf75Q9HAS0 396 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 A6NJR5 290 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 PDXKO00764 312 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 MAFO75444 373 aaPredicted RBP15.73■□□□□ 0.11
USP39-220ENST00000613444 RFC5P40937 340 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 POLGP54098 1239 aaPredicted RBP15.73■□□□□ 0.11
USP39-220ENST00000613444 SPAG1Q07617 926 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 NRBP1Q9UHY1 535 aa15.73■□□□□ 0.11
USP39-220ENST00000613444 IGKV6-21A0A0C4DH24 114 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 DYNC1LI2O43237 492 aaPredicted RBP15.72■□□□□ 0.11
USP39-220ENST00000613444 ZNF286BP0CG31 522 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 CYBAP13498 195 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 EEF1GP26641 437 aaKnown RBP15.72■□□□□ 0.11
USP39-220ENST00000613444 ARL2P36404 184 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 NPTX2P47972 431 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 GTF2BQ00403 316 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 FKBP3Q00688 224 aaKnown RBP15.72■□□□□ 0.11
USP39-220ENST00000613444 NR1I3Q14994 352 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 EDRF1Q3B7T1 1238 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 TMEM161BQ8NDZ6 487 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 SPIRE2Q8WWL2 714 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 TSG101Q99816 390 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 POLR3FQ9H1D9 316 aaPredicted RBP15.72■□□□□ 0.11
USP39-220ENST00000613444 PCDHB13Q9Y5F0 798 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 K7ENM7 598 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 GPR25O00155 361 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 HBP1O60381 514 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 IRX5P78411 483 aaPredicted RBP15.72■□□□□ 0.11
USP39-220ENST00000613444 KIF22Q14807 665 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 HAUS6Q7Z4H7 955 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 TLK2Q86UE8 772 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 CD99L2Q8TCZ2 262 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 SLC7A3Q8WY07 619 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 TMEM143Q96AN5 459 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 TYW1Q9NV66 732 aaKnown RBP15.72■□□□□ 0.11
USP39-220ENST00000613444 FAM184BQ9ULE4 1060 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 Q9Y3F1 56 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 ADGRA3Q8IWK6 1321 aa15.72■□□□□ 0.11
USP39-220ENST00000613444 SLC16A4O15374 487 aa15.71■□□□□ 0.11
USP39-220ENST00000613444 CBFA2T2O43439 604 aa15.71■□□□□ 0.11
USP39-220ENST00000613444 DMP1Q13316 513 aaPredicted RBP15.71■□□□□ 0.11
USP39-220ENST00000613444 MKRN4PQ13434 485 aaPredicted RBP15.71■□□□□ 0.11
USP39-220ENST00000613444 DRP2Q13474 957 aa15.71■□□□□ 0.11
USP39-220ENST00000613444 ALCAMQ13740 583 aa15.71■□□□□ 0.11
USP39-220ENST00000613444 DGKDQ16760 1214 aa15.71■□□□□ 0.11
USP39-220ENST00000613444 SPC24Q8NBT2 197 aa15.71■□□□□ 0.11
USP39-220ENST00000613444 CNOT6LQ96LI5 555 aaKnown RBP15.71■□□□□ 0.11
USP39-220ENST00000613444 KIFC3Q9BVG8 833 aa15.71■□□□□ 0.11
USP39-220ENST00000613444 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
USP39-220ENST00000613444 CEP350Q5VT06 3117 aa15.71■□□□□ 0.1
USP39-220ENST00000613444 H3BRB1 525 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 COPB1P53618 953 aaKnown RBP15.7■□□□□ 0.1
USP39-220ENST00000613444 TRIM32Q13049 653 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 ASAP3Q8TDY4 903 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 TRAPPC12Q8WVT3 735 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 KCNN1Q92952 543 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 CTAGE1Q96RT6 745 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 TUT1Q9H6E5 874 aaKnown RBP15.7■□□□□ 0.1
USP39-220ENST00000613444 SRRDQ9UH36 339 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 TEX33O43247 280 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 AKR1A1P14550 325 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 GLRA2P23416 452 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 TBC1D8BQ0IIM8 1120 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 NFIL3Q16649 462 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 MFSD14CQ5VZR4 134 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 SLC17A8Q8NDX2 589 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 CEP63Q96MT8 703 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 TAB2Q9NYJ8 693 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 ARHGAP28Q9P2N2 729 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 TRPC6Q9Y210 931 aa15.7■□□□□ 0.1
USP39-220ENST00000613444 INSRRP14616 1297 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 PBX1P40424 430 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 PTPN21Q16825 1174 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 FAM114A1Q8IWE2 563 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 KMT5AQ9NQR1 393 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 SAGE1Q9NXZ1 904 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 BRCA2P51587 3418 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 CCDC169A6NNP5 214 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 CALUO43852 315 aaPredicted RBP15.69■□□□□ 0.1
USP39-220ENST00000613444 FGFR1OPO95684 399 aaKnown RBP15.69■□□□□ 0.1
USP39-220ENST00000613444 NR2F2P24468 414 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 SMTNP53814 917 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 MARSP56192 900 aaKnown RBP15.69■□□□□ 0.1
USP39-220ENST00000613444 CACNB2Q08289 660 aaPredicted RBP15.69■□□□□ 0.1
USP39-220ENST00000613444 ADAM9Q13443 819 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 ZNF484Q5JVG2 852 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 MIIPQ5JXC2 388 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 TAS1R3Q7RTX0 852 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 VSTM4Q8IW00 320 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 KAT2BQ92831 832 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 TUBGCP2Q9BSJ2 902 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 GBP3Q9H0R5 595 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 VPS16Q9H269 839 aa15.69■□□□□ 0.1
USP39-220ENST00000613444 ZNF215Q9UL58 517 aaPredicted RBP15.69■□□□□ 0.1
USP39-220ENST00000613444 TRIP12Q14669 1992 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms