RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 PPP1R16BQ96T49 567 aa12.64□□□□□ -0.39
CCL3L3-201ENST00000612839 AKT3Q9Y243 479 aa12.64□□□□□ -0.39
CCL3L3-201ENST00000612839 ZDHHC9Q9Y397 364 aa12.64□□□□□ -0.39
CCL3L3-201ENST00000612839 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
CCL3L3-201ENST00000612839 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 ACTN1P12814 892 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 RFC5P40937 340 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 POLGP54098 1239 aaPredicted RBP12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 KIZQ2M2Z5 673 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 TMEM40Q8WWA1 233 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 NACC1Q96RE7 527 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 MAP7D2Q96T17 732 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 AGO3Q9H9G7 860 aaKnown RBP12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 DBR1Q9UK59 544 aaKnown RBP12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 KIAA1024Q9UPX6 916 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 GINS2Q9Y248 185 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 SQORQ9Y6N5 450 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 SZT2Q5T011 3432 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 GBF1Q92538 1859 aa12.63□□□□□ -0.39
CCL3L3-201ENST00000612839 BAIAP3O94812 1187 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 BRD1O95696 1058 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 MARCKSP29966 332 aaPredicted RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 GPC3P51654 580 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 EMC2Q15006 297 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 FAM109BQ6ICB4 259 aaPredicted RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 TSHZ1Q6ZSZ6 1077 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 EXOC8Q8IYI6 725 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 SEPT8Q92599 483 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 ZNF668Q96K58 619 aaPredicted RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 AK8Q96MA6 479 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 OSMRQ99650 979 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 JPH2Q9BR39 696 aaPredicted RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 MTIF3Q9H2K0 278 aaKnown RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 ADAMTS10Q9H324 1103 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 XPNPEP1Q9NQW7 623 aa12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 FBXO2Q9UK22 296 aaPredicted RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 MORC2Q9Y6X9 1032 aaPredicted RBP12.62□□□□□ -0.39
CCL3L3-201ENST00000612839 ABHD14A-ACY1A0A1B0GW23 586 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 ZBBXA8MT70 800 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 GAS2O43903 313 aaKnown RBP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 DGAT1O75907 488 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 CD52P31358 61 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 DNM2P50570 870 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 CRYBB1P53674 252 aaPredicted RBP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 IKBKEQ14164 716 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 FOXD4L6Q3SYB3 417 aaPredicted RBP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 HYIQ5T013 277 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 FOXD4L3Q6VB84 417 aaPredicted RBP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 KSR1Q8IVT5 923 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 USP38Q8NB14 1042 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 LINC00301Q8NCQ3 95 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 APBB2Q92870 758 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 TMEM143Q96AN5 459 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 PNMA5Q96PV4 448 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 MTRQ99707 1265 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 SUCLA2Q9P2R7 463 aaPredicted RBP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 PADI3Q9ULW8 664 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 SRPRBQ9Y5M8 271 aaKnown RBP12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 SLC4A7Q9Y6M7 1214 aa12.61□□□□□ -0.39
CCL3L3-201ENST00000612839 GRXCR1A8MXD5 290 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 E9PMD0 336 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 WDR5P61964 334 aaKnown RBP12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 GRB10Q13322 594 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 KCNK18Q7Z418 384 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 CABP7Q86V35 215 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 RHPN2Q8IUC4 686 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 PRPF31Q8WWY3 499 aaKnown RBP12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 CCDC43Q96MW1 224 aaKnown RBP12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 CSRNP2Q9H175 543 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 BHMT2Q9H2M3 363 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 ATP6V0A4Q9HBG4 840 aa12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 NOC2LQ9Y3T9 749 aaKnown RBP12.6□□□□□ -0.39
CCL3L3-201ENST00000612839 A0A087WZ62 844 aa12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 USO1O60763 962 aaKnown RBP12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 EFCAB14O75071 495 aa12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 RPS6KA5O75582 802 aa12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 YEATS4O95619 227 aa12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 EIF4BP23588 611 aaKnown RBP12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 DDIT3P35638 169 aa12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 UBA7P41226 1012 aa12.59□□□□□ -0.39
CCL3L3-201ENST00000612839 DEFB103AP81534 67 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms