RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GOLGA8IPA6NC78 632 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 GOLGA8JA6NMD2 632 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 VGLL3A8MV65 326 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 DHX15O43143 795 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 SLC26A4O43511 780 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 EXOC3O60645 756 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 B3GNT9Q6UX72 402 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 SAMD7Q7Z3H4 446 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 INPP4AQ96PE3 977 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 GPR88Q9GZN0 384 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 FEM1BQ9UK73 627 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 ZNRF3Q9ULT6 936 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 PHF20L1A8MW92 1017 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 HEXIM1O94992 359 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 HOXA7P31268 230 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 NPEPPSP55786 919 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 MAP9Q49MG5 647 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 DNAJC21Q5F1R6 531 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 TTC19Q6DKK2 380 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 POTEAQ6S8J7 498 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 ZNF572Q7Z3I7 529 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 FAM71BQ8TC56 605 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 FBXO41Q8TF61 875 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 KAT5Q92993 513 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 EXOC4Q96A65 974 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 METTL14Q9HCE5 456 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 TMEM51Q9NW97 253 aa15.36■□□□□ 0.05
PCDHGA3-202ENST00000612467 COL2A1P02458 1487 aaPredicted RBP15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 FLOT1O75955 427 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 ICAM1P05362 532 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 PHLDB3Q6NSJ2 640 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 RTKN2Q8IZC4 609 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 MYOZ2Q9NPC6 264 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 PSME4Q14997 1843 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 F8VZ95 297 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 CEP104O60308 925 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 TUBBP07437 444 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 ZNF131P52739 623 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 SP4Q02446 784 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 MTMR2Q13614 643 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 TKFCQ3LXA3 575 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 NSMFQ6X4W1 530 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 DDX42Q86XP3 938 aaKnown RBP eCLIP15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 PSMD1Q99460 953 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 RIPK3Q9Y572 518 aa15.35■□□□□ 0.05
PCDHGA3-202ENST00000612467 EIF3DO15371 548 aaKnown RBP eCLIP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 RAD51CO43502 376 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 ASNSP08243 561 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 ITGA4P13612 1032 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 GCLMP48507 274 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 HSD17B4P51659 736 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 GALCP54803 685 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 RPS6P62753 249 aaKnown RBP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 ZSCAN26Q16670 478 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 CCDC70Q6NSX1 233 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 HS2ST1Q7LGA3 356 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 ADAT2Q7Z6V5 191 aaKnown RBP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 FAM160B2Q86V87 743 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 LRRC57Q8N9N7 239 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 PLEKHO2Q8TD55 490 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 SYTL5Q8TDW5 730 aaPredicted RBP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 SLC20A1Q8WUM9 679 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 INTS2Q9H0H0 1204 aaKnown RBP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 RGS17Q9UGC6 210 aaPredicted RBP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 GOLGA6BA6NDN3 693 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 COPB2P35606 906 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 PPP3CAQ08209 521 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 RPS6KA1Q15418 735 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 ZNF746Q6NUN9 644 aaPredicted RBP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 TPCN2Q8NHX9 752 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 CASKIN2Q8WXE0 1202 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 ARHGEF26Q96DR7 871 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 LUC7LQ9NQ29 371 aaKnown RBP15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 USP20Q9Y2K6 914 aa15.34■□□□□ 0.05
PCDHGA3-202ENST00000612467 BACH1O14867 736 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 SLC16A4O15374 487 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 KIF4AO95239 1232 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 AARSP49588 968 aaKnown RBP eCLIP15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 ARHGEF19Q8IW93 802 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 METTL13Q8N6R0 699 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 ARL8AQ96BM9 186 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 TEPSINQ96N21 525 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 FRMD4BQ9Y2L6 1034 aa15.33■□□□□ 0.05
PCDHGA3-202ENST00000612467 EMSYQ7Z589 1322 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 TESPA1A2RU30 521 aaPredicted RBP15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 FOXN3O00409 490 aaPredicted RBP15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 ZBTB7AO95365 584 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 MCM3P25205 808 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 PRKCIP41743 596 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 RARRES1P49788 294 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 MYL7Q01449 175 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 MTMR1Q13613 665 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 DDX47Q9H0S4 455 aaKnown RBP15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 AGO4Q9HCK5 861 aaKnown RBP15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 DMAC2Q9NW81 257 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.04
PCDHGA3-202ENST00000612467 FER1L6Q2WGJ9 1857 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms