RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 NPTX2P47972 431 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 DNM2P50570 870 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 SMTNP53814 917 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 RTP1P59025 263 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 GTF2BQ00403 316 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 NOGQ13253 232 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 DMP1Q13316 513 aaPredicted RBP13.54□□□□□ -0.24
CBWD1-220ENST00000612045 EMC2Q15006 297 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 TARBP2Q15633 366 aaKnown RBP13.54□□□□□ -0.24
CBWD1-220ENST00000612045 ITIH6Q6UXX5 1313 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 SPIRE2Q8WWL2 714 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 DHX33Q9H6R0 707 aaKnown RBP13.54□□□□□ -0.24
CBWD1-220ENST00000612045 GJD2Q9UKL4 321 aa13.54□□□□□ -0.24
CBWD1-220ENST00000612045 CCDC169A6NNP5 214 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 TNPO2O14787 897 aaKnown RBP13.53□□□□□ -0.24
CBWD1-220ENST00000612045 SLC16A4O15374 487 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 ALDH1A1P00352 501 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 NR3C1P04150 777 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 RPL13P26373 211 aaKnown RBP13.53□□□□□ -0.24
CBWD1-220ENST00000612045 MARK3P27448 753 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 SLC26A2P50443 739 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 MARSP56192 900 aaKnown RBP13.53□□□□□ -0.24
CBWD1-220ENST00000612045 NFIL3Q16649 462 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 MAN2A1Q16706 1144 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 DUSP28Q4G0W2 176 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 CCDC40Q4G0X9 1142 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 VWA3BQ502W6 1294 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 HAUS6Q7Z4H7 955 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 PPTC7Q8NI37 304 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 ATP8B4Q8TF62 1192 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 SLC7A3Q8WY07 619 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
CBWD1-220ENST00000612045 BSNDQ8WZ55 320 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 NTPCRQ9BSD7 190 aaKnown RBP13.53□□□□□ -0.24
CBWD1-220ENST00000612045 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 IKZF4Q9H2S9 585 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 SMARCAD1Q9H4L7 1026 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 FLRT1Q9NZU1 646 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 ZHX1Q9UKY1 873 aaPredicted RBP13.53□□□□□ -0.24
CBWD1-220ENST00000612045 PPME1Q9Y570 386 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 CLIC2O15247 247 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 SMPD1P17405 629 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 CYP2B6P20813 491 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 RFC5P40937 340 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 RGS2P41220 211 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 PLCB4Q15147 1175 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 SYCP3Q8IZU3 236 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 GOLGA5Q8TBA6 731 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 SOCS4Q8WXH5 440 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 ACCSQ96QU6 501 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 POLR3FQ9H1D9 316 aaPredicted RBP13.53□□□□□ -0.24
CBWD1-220ENST00000612045 NDST4Q9H3R1 872 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 KMT5AQ9NQR1 393 aa13.53□□□□□ -0.24
CBWD1-220ENST00000612045 RASSF10A6NK89 507 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 AOC2O75106 756 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 CTGFP29279 349 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 TBC1D8BQ0IIM8 1120 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 IRF5Q13568 498 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 DEFB115Q30KQ5 88 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 TRIM59Q8IWR1 403 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 TMEM143Q96AN5 459 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 IFT74Q96LB3 600 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 KIFC3Q9BVG8 833 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 AGPAT3Q9NRZ7 376 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 PYCARDQ9ULZ3 195 aa13.52□□□□□ -0.25
CBWD1-220ENST00000612045 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.25
CBWD1-220ENST00000612045 SLC16A3O15427 465 aaKnown RBP13.51□□□□□ -0.25
CBWD1-220ENST00000612045 MAFO75444 373 aaPredicted RBP13.51□□□□□ -0.25
CBWD1-220ENST00000612045 AKAP3O75969 853 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 ARL2P36404 184 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 CCZ1BP86790 482 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 CCZ1P86791 482 aaPredicted RBP13.51□□□□□ -0.25
CBWD1-220ENST00000612045 RBL2Q08999 1139 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 GOLGA8FQ08AF8 430 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 GOLGA8DPQ0D2H9 430 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 CCL14Q16627 93 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 PRAMEF19Q5SWL8 479 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 FKBP15Q5T1M5 1219 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 OLFML2BQ68BL8 750 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 FRMD5Q7Z6J6 570 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 PPFIBP1Q86W92 1011 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 HVCN1Q96D96 273 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 APBA2Q99767 749 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 CREBZFQ9NS37 354 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 ERAP1Q9NZ08 941 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 KCNG1Q9UIX4 513 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 TBX20Q9UMR3 447 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 CENPFP49454 3210 aa13.51□□□□□ -0.25
CBWD1-220ENST00000612045 DENND3A2RUS2 1198 aa13.5□□□□□ -0.25
CBWD1-220ENST00000612045 ZBTB42B2RXF5 422 aa13.5□□□□□ -0.25
CBWD1-220ENST00000612045 PPFIA4O75335 1185 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms