RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 EPHA7Q15375 998 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 IL17AQ16552 155 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 ECM1Q16610 540 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 PAN2Q504Q3 1202 aaKnown RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 EPC2Q52LR7 807 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 XKR3Q5GH77 459 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 FAM102BQ5T8I3 360 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 BRAPQ7Z569 592 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 RSPH3Q86UC2 560 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 NME8Q8N427 588 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 RDM1Q8NG50 284 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 APBB2Q92870 758 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 TGS1Q96RS0 853 aaKnown RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 ADAM2Q99965 735 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 EIF2AK1Q9BQI3 630 aaKnown RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 LXNQ9BS40 222 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 COL25A1Q9BXS0 654 aaPredicted RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 MINDY3Q9H8M7 445 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 NOL7Q9UMY1 257 aaKnown RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 AKT3Q9Y243 479 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 INSL6Q9Y581 213 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 MRPL42Q9Y6G3 142 aaKnown RBP9.71□□□□□ -0.86
SNCA-212ENST00000611107 NCOR1O75376 2440 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 XIRP2A4UGR9 3374 aa9.71□□□□□ -0.86
SNCA-212ENST00000611107 A0A087WZ62 844 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 MEIS3P2A8K0S8 358 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 TBX3O15119 743 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 GRM6O15303 877 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 EFCAB14O75071 495 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 MED24O75448 989 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 RPS6KA5O75582 802 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 CSPG5O95196 566 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 P4HBP07237 508 aaKnown RBP9.7□□□□□ -0.86
SNCA-212ENST00000611107 FGFR1P11362 822 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 ATF7P17544 494 aaPredicted RBP9.7□□□□□ -0.86
SNCA-212ENST00000611107 TXKP42681 527 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 QARSP47897 775 aaKnown RBP9.7□□□□□ -0.86
SNCA-212ENST00000611107 PAK2Q13177 524 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 ORC2Q13416 577 aaPredicted RBP9.7□□□□□ -0.86
SNCA-212ENST00000611107 CAMK1Q14012 370 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 CALCRLQ16602 461 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 RILPL1Q5EBL4 403 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 FAM173BQ6P4H8 233 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 PIGOQ8TEQ8 1089 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 TMEM143Q96AN5 459 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 FAM167AQ96KS9 214 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 YME1L1Q96TA2 773 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 HSD17B14Q9BPX1 270 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 FDXACB1Q9BRP7 624 aaPredicted RBP9.7□□□□□ -0.86
SNCA-212ENST00000611107 TTC12Q9H892 705 aaPredicted RBP9.7□□□□□ -0.86
SNCA-212ENST00000611107 POLD4Q9HCU8 107 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 CYP26B1Q9NR63 512 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.7□□□□□ -0.86
SNCA-212ENST00000611107 NRBP2Q9NSY0 501 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 TCEAL9Q9UHQ7 104 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 PCDHGC5Q9Y5F6 944 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 SQORQ9Y6N5 450 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 TRIP11Q15643 1979 aa9.7□□□□□ -0.86
SNCA-212ENST00000611107 MAGEB2O15479 319 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
SNCA-212ENST00000611107 OR52Z1P0C646 297 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 DARSP14868 501 aaKnown RBP9.69□□□□□ -0.86
SNCA-212ENST00000611107 DDIT3P35638 169 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 FAM189BP81408 668 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 TBC1D8BQ0IIM8 1120 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 LRRC55Q6ZSA7 311 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 ADGRA3Q8IWK6 1321 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 TPH2Q8IWU9 490 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 C4orf19Q8IY42 314 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 TMEM192Q8IY95 271 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 SLFN12Q8IYM2 578 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 FBXO22Q8NEZ5 403 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 ASAP3Q8TDY4 903 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 NECAB3Q96P71 396 aaPredicted RBP9.69□□□□□ -0.86
SNCA-212ENST00000611107 DHX33Q9H6R0 707 aaKnown RBP9.69□□□□□ -0.86
SNCA-212ENST00000611107 IFT122Q9HBG6 1241 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 RGS18Q9NS28 235 aa9.69□□□□□ -0.86
SNCA-212ENST00000611107 SUCLA2Q9P2R7 463 aaPredicted RBP9.69□□□□□ -0.86
SNCA-212ENST00000611107 PP2D1A8MPX8 630 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 M0QZ92 97 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 B4GALT3O60512 393 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 F13A1P00488 732 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 ZSCAN22P10073 491 aaPredicted RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 CDC25AP30304 524 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 YWHABP31946 246 aaKnown RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 GTF2F1P35269 517 aaKnown RBP eCLIP9.68□□□□□ -0.86
SNCA-212ENST00000611107 ANP32AP39687 249 aaKnown RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 PBX3P40426 434 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 SARSP49591 514 aaKnown RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 KCNQ1P51787 676 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 ATP2C1P98194 919 aaPredicted RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 PTGDRQ13258 359 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 LONRF3Q496Y0 759 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 CLLU1OSQ5K130 101 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 FOXD4L5Q5VV16 416 aaPredicted RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 CATSPER3Q86XQ3 398 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 RHPN2Q8IUC4 686 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms