RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 COL4A3BPQ9Y5P4 624 aa12.79□□□□□ -0.36
CTCFL-221ENST00000608903 TBCAO75347 108 aaKnown RBP12.78□□□□□ -0.36
CTCFL-221ENST00000608903 C22orf31O95567 290 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 PSEN2P49810 448 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 CPT1AP50416 773 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 LBX1P52954 281 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 POLGP54098 1239 aaPredicted RBP12.78□□□□□ -0.36
CTCFL-221ENST00000608903 TERF1P54274 439 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 IGBP1P78318 339 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 MTFR1Q15390 333 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 KIAA0753Q2KHM9 967 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 LRRC71Q8N4P6 559 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
CTCFL-221ENST00000608903 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
CTCFL-221ENST00000608903 ADGRA3Q8IWK6 1321 aa12.78□□□□□ -0.36
CTCFL-221ENST00000608903 TRIP12Q14669 1992 aaPredicted RBP12.77□□□□□ -0.36
CTCFL-221ENST00000608903 PRPF6O94906 941 aaKnown RBP12.77□□□□□ -0.36
CTCFL-221ENST00000608903 GJB1P08034 283 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 PLS3P13797 630 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 GAP43P17677 238 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 CHMP4BP1P59074 171 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 MFSD10Q14728 455 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 ODR4Q5SWX8 454 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 CXCL17Q6UXB2 119 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.77□□□□□ -0.36
CTCFL-221ENST00000608903 ZNF720Q7Z2F6 126 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 LINC01465Q8N7H1 131 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 NELFBQ8WX92 580 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 KIFC3Q9BVG8 833 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 OLFML3Q9NRN5 406 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 SETD4Q9NVD3 440 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 FRMPD3Q5JV73 1810 aa12.77□□□□□ -0.36
CTCFL-221ENST00000608903 SCN10AQ9Y5Y9 1956 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 PPP1R37O75864 691 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 MYCP01106 439 aaPredicted RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 HSPA1AP0DMV8 641 aaKnown RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 HSPA1BP0DMV9 641 aaKnown RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 SMIM10L2AP0DMW4 78 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 SMIM10L2BP0DMW5 78 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 GLRA2P23416 452 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 KLRC1P26715 233 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 RFC5P40937 340 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 NPTX2P47972 431 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 PEX3P56589 373 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF200P98182 395 aaPredicted RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 KCNA10Q16322 511 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 ANKRD40Q6AI12 368 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 CCDC47Q96A33 483 aaKnown RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 DUSP9Q99956 384 aaKnown RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 TIPINQ9BVW5 301 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 MRPL44Q9H9J2 332 aaKnown RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF215Q9UL58 517 aaPredicted RBP12.77□□□□□ -0.37
CTCFL-221ENST00000608903 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
CTCFL-221ENST00000608903 SLC16A4O15374 487 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 CLCN3P51790 818 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 ADAM17P78536 824 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 TBC1D8BQ0IIM8 1120 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 GRIK4Q16099 956 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 TTI2Q6NXR4 508 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 NELFCDQ8IXH7 590 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 GUF1Q8N442 669 aaKnown RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 MCPH1Q8NEM0 835 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF507Q8TCN5 953 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 SUGCTQ9HAC7 445 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF500O60304 480 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 ASGR1P07306 291 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 PPFIA1Q13136 1202 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 CENPPQ6IPU0 288 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 EFCAB12Q6NXP0 572 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 TAS1R3Q7RTX0 852 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 MYOCDQ8IZQ8 938 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 LMBR1Q8WVP7 490 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 SLC7A3Q8WY07 619 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 DHTKD1Q96HY7 919 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 DRC1Q96MC2 740 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 NTPCRQ9BSD7 190 aaKnown RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 SAMSN1Q9NSI8 373 aaKnown RBP12.76□□□□□ -0.37
CTCFL-221ENST00000608903 FANCLQ9NW38 375 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 HDAC6Q9UBN7 1215 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 SEL1LQ9UBV2 794 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
CTCFL-221ENST00000608903 ZMYM2Q9UBW7 1377 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 GCNT3O95395 438 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 CAVIN2O95810 425 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-221ENST00000608903 CCNE1P24864 410 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 NCKAP1LP55160 1127 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms