RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 LRCH2Q5VUJ6 765 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 SRRM1Q8IYB3 904 aaKnown RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 PIAS4Q8N2W9 510 aaPredicted RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 RAPGEF5Q92565 580 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 KRT35Q92764 455 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 PDGFDQ9GZP0 370 aaPredicted RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 DHX36Q9H2U1 1008 aaKnown RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 PPP1R11O60927 126 aaPredicted RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 EZRP15311 586 aaKnown RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 POLD1P28340 1107 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 ECE1P42892 770 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 TUBB4BP68371 445 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 LRRC63Q05C16 580 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 DGKZQ13574 1117 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 PPP2R5AQ15172 486 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 MEA1Q16626 185 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 LRRC55Q6ZSA7 311 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 FBXO11Q86XK2 927 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 TTC16Q8NEE8 873 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 ZSWIM2Q8NEG5 633 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 NEDD1Q8NHV4 660 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 HAS1Q92839 578 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 HVCN1Q96D96 273 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 PPP1R16BQ96T49 567 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 MYCBPQ99417 103 aaPredicted RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 TCHPQ9BT92 498 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 EPN3Q9H201 632 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 SLC40A1Q9NP59 571 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 POLLQ9UGP5 575 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 TRIM33Q9UPN9 1127 aa7.01□□□□□ -1.29
RPF2-204ENST00000607388 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.01□□□□□ -1.29
RPF2-204ENST00000607388 TUBGCP6Q96RT7 1819 aa7□□□□□ -1.29
RPF2-204ENST00000607388 FOXN3O00409 490 aaPredicted RBP7□□□□□ -1.29
RPF2-204ENST00000607388 NOL4O94818 638 aa7□□□□□ -1.29
RPF2-204ENST00000607388 MAP3K6O95382 1288 aa7□□□□□ -1.29
RPF2-204ENST00000607388 RPL13P26373 211 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 ADCY8P40145 1251 aa7□□□□□ -1.29
RPF2-204ENST00000607388 FAM102BQ5T8I3 360 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ISLR2Q6UXK2 745 aa7□□□□□ -1.29
RPF2-204ENST00000607388 RUFY4Q6ZNE9 571 aa7□□□□□ -1.29
RPF2-204ENST00000607388 MMGT1Q8N4V1 131 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7□□□□□ -1.29
RPF2-204ENST00000607388 PRPF38AQ8NAV1 312 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 DHX38Q92620 1227 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 SEC16BQ96JE7 1060 aa7□□□□□ -1.29
RPF2-204ENST00000607388 TTYH3Q9C0H2 523 aa7□□□□□ -1.29
RPF2-204ENST00000607388 C10orf88Q9H8K7 445 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ERVK-5Q9HDB9 667 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ATRNO75882 1429 aa7□□□□□ -1.29
RPF2-204ENST00000607388 COL1A1P02452 1464 aaPredicted RBP7□□□□□ -1.29
RPF2-204ENST00000607388 TARSL2A2RTX5 802 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 TESPA1A2RU30 521 aaPredicted RBP7□□□□□ -1.29
RPF2-204ENST00000607388 EML1O00423 815 aa7□□□□□ -1.29
RPF2-204ENST00000607388 CLDN3O15551 220 aa7□□□□□ -1.29
RPF2-204ENST00000607388 CYP26A1O43174 497 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ALAS1P13196 640 aa7□□□□□ -1.29
RPF2-204ENST00000607388 CTNNA2P26232 953 aa7□□□□□ -1.29
RPF2-204ENST00000607388 PON1P27169 355 aa7□□□□□ -1.29
RPF2-204ENST00000607388 PPP2R2AP63151 447 aa7□□□□□ -1.29
RPF2-204ENST00000607388 RNASELQ05823 741 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 NAB2Q15742 525 aa7□□□□□ -1.29
RPF2-204ENST00000607388 IFI16Q16666 785 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 KNOP1Q1ED39 458 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 WDR78Q5VTH9 848 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ALS2CLQ60I27 953 aa7□□□□□ -1.29
RPF2-204ENST00000607388 HGSNATQ68CP4 663 aa7□□□□□ -1.29
RPF2-204ENST00000607388 CCDC63Q8NA47 563 aa7□□□□□ -1.29
RPF2-204ENST00000607388 RBM46Q8TBY0 533 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 ZNF653Q96CK0 615 aa7□□□□□ -1.29
RPF2-204ENST00000607388 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 DDX23Q9BUQ8 820 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 EFCC1Q9HA90 598 aa7□□□□□ -1.29
RPF2-204ENST00000607388 LRRC4BQ9NT99 713 aa7□□□□□ -1.29
RPF2-204ENST00000607388 FGFR1OP2Q9NVK5 253 aa7□□□□□ -1.29
RPF2-204ENST00000607388 MYO3BQ8WXR4 1341 aa7□□□□□ -1.29
RPF2-204ENST00000607388 PNMA6FA0A0J9YX94 578 aa7□□□□□ -1.29
RPF2-204ENST00000607388 TCRBV7S2A1N4TA0A589 114 aa7□□□□□ -1.29
RPF2-204ENST00000607388 F5H6K3 240 aa7□□□□□ -1.29
RPF2-204ENST00000607388 PIK3R2O00459 728 aa7□□□□□ -1.29
RPF2-204ENST00000607388 CALUO43852 315 aaPredicted RBP7□□□□□ -1.29
RPF2-204ENST00000607388 ABCC6O95255 1503 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ABCB11O95342 1321 aa7□□□□□ -1.29
RPF2-204ENST00000607388 KRT15P19012 456 aa7□□□□□ -1.29
RPF2-204ENST00000607388 EIF2AK2P19525 551 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 BAG6P46379 1132 aa7□□□□□ -1.29
RPF2-204ENST00000607388 PEX3P56589 373 aa7□□□□□ -1.29
RPF2-204ENST00000607388 KLRC3Q07444 240 aa7□□□□□ -1.29
RPF2-204ENST00000607388 KYNUQ16719 465 aa7□□□□□ -1.29
RPF2-204ENST00000607388 SEL1L2Q5TEA6 688 aa7□□□□□ -1.29
RPF2-204ENST00000607388 KDM3BQ7LBC6 1761 aa7□□□□□ -1.29
RPF2-204ENST00000607388 VSIG1Q86XK7 387 aa7□□□□□ -1.29
RPF2-204ENST00000607388 LRRC34Q8IZ02 419 aa7□□□□□ -1.29
RPF2-204ENST00000607388 ANKS4BQ8N8V4 417 aa7□□□□□ -1.29
RPF2-204ENST00000607388 RNF25Q96BH1 459 aaPredicted RBP7□□□□□ -1.29
RPF2-204ENST00000607388 NT5C3AQ9H0P0 336 aa7□□□□□ -1.29
RPF2-204ENST00000607388 STK17AQ9UEE5 414 aa7□□□□□ -1.29
RPF2-204ENST00000607388 DDX20Q9UHI6 824 aaKnown RBP7□□□□□ -1.29
RPF2-204ENST00000607388 MAGED2Q9UNF1 606 aaPredicted RBP7□□□□□ -1.29
RPF2-204ENST00000607388 IGSF9BQ9UPX0 1349 aa6.99□□□□□ -1.29
RPF2-204ENST00000607388 FAM86B1E9PN63 330 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms