RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 AMHP03971 560 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 CA3P07451 260 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 PSMC5P62195 406 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 TARBP2Q15633 366 aaKnown RBP11.21□□□□□ -0.61
CTSA-215ENST00000607187 TSHZ1Q6ZSZ6 1077 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 LINC01465Q8N7H1 131 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 USP38Q8NB14 1042 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 MYLIPQ8WY64 445 aa11.21□□□□□ -0.61
CTSA-215ENST00000607187 NIFKQ9BYG3 293 aaKnown RBP11.21□□□□□ -0.61
CTSA-215ENST00000607187 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
CTSA-215ENST00000607187 PRRC2BQ5JSZ5 2229 aaKnown RBP11.21□□□□□ -0.62
CTSA-215ENST00000607187 XIRP2A4UGR9 3374 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.2□□□□□ -0.62
CTSA-215ENST00000607187 MARCH6O60337 910 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 P4HBP07237 508 aaKnown RBP11.2□□□□□ -0.62
CTSA-215ENST00000607187 QARSP47897 775 aaKnown RBP11.2□□□□□ -0.62
CTSA-215ENST00000607187 TAP1Q03518 808 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 CALCRLQ16602 461 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 XKR3Q5GH77 459 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 EFCAB12Q6NXP0 572 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 MYOCDQ8IZQ8 938 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 METTL13Q8N6R0 699 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 TOP1MTQ969P6 601 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 MTMR9Q96QG7 549 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 CEP89Q96ST8 783 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 RAD9AQ99638 391 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 ZBED2Q9BTP6 218 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 ADAM33Q9BZ11 813 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 SEPT9Q9UHD8 586 aaPredicted RBP11.2□□□□□ -0.62
CTSA-215ENST00000607187 NLRC5Q86WI3 1866 aa11.2□□□□□ -0.62
CTSA-215ENST00000607187 LCHNA4D1U4 455 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 NEMFO60524 1076 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 GPR32O75388 356 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 ARHGEF15O94989 841 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 FOSL2P15408 326 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 NDUFV2P19404 249 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 U2AF2P26368 475 aaKnown RBP eCLIP11.19□□□□□ -0.62
CTSA-215ENST00000607187 TMOD1P28289 359 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 CD52P31358 61 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 EPHA7Q15375 998 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 ANO5Q75V66 913 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 NOSTRINQ8IVI9 506 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 PRDM12Q9H4Q4 367 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 TTC12Q9H892 705 aaPredicted RBP11.19□□□□□ -0.62
CTSA-215ENST00000607187 PADI3Q9ULW8 664 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 PCDHA12Q9UN75 941 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 KIF3AQ9Y496 699 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
CTSA-215ENST00000607187 SPTBN5Q9NRC6 3674 aaKnown RBP11.19□□□□□ -0.62
CTSA-215ENST00000607187 IGKV6-21A0A0C4DH24 114 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 TMEM150BA6NC51 233 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 ENPP3O14638 875 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 DKC1O60832 514 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTSA-215ENST00000607187 VTNP04004 478 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 ATP2B1P20020 1258 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 MCM7P33993 719 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 TRAPPC10P48553 1259 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 CLCN3P51790 818 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 CRYBB1P53674 252 aaPredicted RBP11.18□□□□□ -0.62
CTSA-215ENST00000607187 HTRA4P83105 476 aaPredicted RBP11.18□□□□□ -0.62
CTSA-215ENST00000607187 TBC1D8BQ0IIM8 1120 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 PAK2Q13177 524 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 ORC2Q13416 577 aaPredicted RBP11.18□□□□□ -0.62
CTSA-215ENST00000607187 KIZQ2M2Z5 673 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 MTERF2Q49AM1 385 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 NCAPH2Q6IBW4 605 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 FAM117BQ6P1L5 589 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
CTSA-215ENST00000607187 C4orf19Q8IY42 314 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 LRRC71Q8N4P6 559 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 TMEM40Q8WWA1 233 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 LINC01599Q8WXQ3 324 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 SLC39A7Q92504 469 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 MAP7D2Q96T17 732 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 LXNQ9BS40 222 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 FTHL17Q9BXU8 183 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 SUGCTQ9HAC7 445 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 RGL1Q9NZL6 768 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 WRAP73Q9P2S5 460 aaPredicted RBP11.18□□□□□ -0.62
CTSA-215ENST00000607187 GINS2Q9Y248 185 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 INSL6Q9Y581 213 aa11.18□□□□□ -0.62
CTSA-215ENST00000607187 COL4A6Q14031 1691 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 MAFO75444 373 aaPredicted RBP11.17□□□□□ -0.62
CTSA-215ENST00000607187 RPS6KA5O75582 802 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 SLITRK3O94933 977 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 UPP2O95045 317 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 GJB2P29033 226 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 TXKP42681 527 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 NLRP11P59045 1033 aaKnown RBP11.17□□□□□ -0.62
CTSA-215ENST00000607187 GNL2Q13823 731 aaKnown RBP11.17□□□□□ -0.62
CTSA-215ENST00000607187 ADGRE1Q14246 886 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 ZNF174Q15697 407 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 TMEM266Q2M3C6 531 aa11.17□□□□□ -0.62
CTSA-215ENST00000607187 RTN4RL1Q86UN2 441 aaPredicted RBP11.17□□□□□ -0.62
CTSA-215ENST00000607187 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms