RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 FAM193AP78312 1265 aa17.36■□□□□ 0.37
CTSA-214ENST00000606788 WDR78Q5VTH9 848 aa17.36■□□□□ 0.37
CTSA-214ENST00000606788 EHBP1Q8NDI1 1231 aa17.36■□□□□ 0.37
CTSA-214ENST00000606788 TRIM58Q8NG06 486 aa17.36■□□□□ 0.37
CTSA-214ENST00000606788 KAT5Q92993 513 aa17.36■□□□□ 0.37
CTSA-214ENST00000606788 VPS33BQ9H267 617 aa17.36■□□□□ 0.37
CTSA-214ENST00000606788 SIX2Q9NPC8 291 aa17.36■□□□□ 0.37
CTSA-214ENST00000606788 LARSQ9P2J5 1176 aaKnown RBP17.36■□□□□ 0.37
CTSA-214ENST00000606788 POLR2AP24928 1970 aaKnown RBP17.36■□□□□ 0.37
CTSA-214ENST00000606788 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 N4BP1O75113 896 aaKnown RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 FMO5P49326 533 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 MARSP56192 900 aaKnown RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 CDK17Q00537 523 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 HAUS6Q7Z4H7 955 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 IRF2BP2Q7Z5L9 587 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 GLYCTKQ8IVS8 523 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 CEP170P1Q96L14 293 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 NOX5Q96PH1 765 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 ALS2CR12Q96Q35 445 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 A1CFQ9NQ94 594 aaKnown RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 SLC18A3Q16572 532 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 LMBRD2Q68DH5 695 aaPredicted RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 ZNF668Q96K58 619 aaPredicted RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 OSBPL9Q96SU4 736 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 TOPORSQ9NS56 1045 aaPredicted RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 GPRC5DQ9NZD1 345 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 DNAJC12Q9UKB3 198 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 ZNF214Q9UL59 606 aaPredicted RBP17.35■□□□□ 0.37
CTSA-214ENST00000606788 RPTORQ8N122 1335 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 MYH11P35749 1972 aa17.35■□□□□ 0.37
CTSA-214ENST00000606788 RGS20O76081 388 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 MYBL2P10244 700 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 USP14P54578 494 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 TTLL12Q14166 644 aaPredicted RBP17.34■□□□□ 0.37
CTSA-214ENST00000606788 PAPD7Q5XG87 772 aaKnown RBP17.34■□□□□ 0.37
CTSA-214ENST00000606788 ZNF746Q6NUN9 644 aaPredicted RBP17.34■□□□□ 0.37
CTSA-214ENST00000606788 ANO5Q75V66 913 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 TMOD4Q9NZQ9 345 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 SEPT9Q9UHD8 586 aaPredicted RBP17.34■□□□□ 0.37
CTSA-214ENST00000606788 SNX12Q9UMY4 172 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 ZNF862O60290 1169 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 DRAP1Q14919 205 aaPredicted RBP17.34■□□□□ 0.37
CTSA-214ENST00000606788 BMT2Q1RMZ1 405 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 ALKBH5Q6P6C2 394 aaKnown RBP17.34■□□□□ 0.37
CTSA-214ENST00000606788 GADL1Q6ZQY3 521 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 TLR10Q9BXR5 811 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 TSGA10Q9BZW7 698 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 ERICH4A6NGS2 130 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 ANKRD63C9JTQ0 380 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 MTERF2Q49AM1 385 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 DPY19L2P1Q6NXN4 242 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 PALB2Q86YC2 1186 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 CBWD2Q8IUF1 395 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 BSNDQ8WZ55 320 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 OTUD5Q96G74 571 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 CLMNQ96JQ2 1002 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 FUT8Q9BYC5 575 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 JRKLQ9Y4A0 524 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 STK24Q9Y6E0 443 aa17.34■□□□□ 0.37
CTSA-214ENST00000606788 EVI5O60447 810 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 MYL7Q01449 175 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 PPP3CAQ08209 521 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 TAF3Q5VWG9 929 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 CREG2Q8IUH2 290 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 ZC3H3Q8IXZ2 948 aaKnown RBP17.33■□□□□ 0.37
CTSA-214ENST00000606788 ANKRD35Q8N283 1001 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 METTL14Q9HCE5 456 aaKnown RBP17.33■□□□□ 0.37
CTSA-214ENST00000606788 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 FER1L6Q2WGJ9 1857 aa17.33■□□□□ 0.37
CTSA-214ENST00000606788 OAS2P29728 719 aaKnown RBP17.33■□□□□ 0.36
CTSA-214ENST00000606788 MAP2K1Q02750 393 aaPredicted RBP17.33■□□□□ 0.36
CTSA-214ENST00000606788 VGLL4Q14135 290 aa17.33■□□□□ 0.36
CTSA-214ENST00000606788 ZNF771Q7L3S4 317 aaPredicted RBP17.33■□□□□ 0.36
CTSA-214ENST00000606788 LRRC1Q9BTT6 524 aa17.33■□□□□ 0.36
CTSA-214ENST00000606788 ELP3Q9H9T3 547 aa17.33■□□□□ 0.36
CTSA-214ENST00000606788 AS3MTQ9HBK9 375 aa17.33■□□□□ 0.36
CTSA-214ENST00000606788 SSU72P8A0A1W2PR75 194 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 ESYT3A0FGR9 886 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 WDR64B1ANS9 1081 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 DSG3P32926 999 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 ZNF131P52739 623 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 SP2Q02086 613 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 PPARDQ03181 441 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 CCDC60Q8IWA6 550 aaPredicted RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 PLEKHO2Q8TD55 490 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 BORCS6Q96GS4 357 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 INTS2Q9H0H0 1204 aaKnown RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 CEP350Q5VT06 3117 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 ATAD5Q96QE3 1844 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 ZSCAN5CA6NGD5 496 aaPredicted RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 EIF3DO15371 548 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTSA-214ENST00000606788 DLATP10515 647 aaKnown RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 LLGL1Q15334 1064 aa17.32■□□□□ 0.36
CTSA-214ENST00000606788 UBE2TQ9NPD8 197 aaPredicted RBP17.32■□□□□ 0.36
CTSA-214ENST00000606788 TBC1D22BQ9NU19 505 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms