RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 MSH4O15457 936 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 EIF5BO60841 1220 aaKnown RBP20.5■□□□□ 0.87
CCDC12-213ENST00000605875 GPR32O75388 356 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 CTDNEP1O95476 244 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 TDP2O95551 362 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 PSAPP07602 524 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 FGFR1P11362 822 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 ERVFC1P60507 584 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 FAM189BP81408 668 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 SMAP1Q8IYB5 467 aaPredicted RBP20.5■□□□□ 0.87
CCDC12-213ENST00000605875 NECAB1Q8N987 351 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 GTF3C6Q969F1 213 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 C22orf23Q9BZE7 217 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 CWH43Q9H720 699 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 ELAC1Q9H777 363 aaKnown RBP20.5■□□□□ 0.87
CCDC12-213ENST00000605875 PCDHA10Q9Y5I2 948 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 WDR81Q562E7 1941 aa20.5■□□□□ 0.87
CCDC12-213ENST00000605875 TECTAO75443 2155 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 CHMP2AO43633 222 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 MRE11P49959 708 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
CCDC12-213ENST00000605875 DSC3Q14574 896 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 ME3Q16798 604 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 PDE12Q6L8Q7 609 aaKnown RBP20.49■□□□□ 0.87
CCDC12-213ENST00000605875 FAM177A1Q8N128 213 aaPredicted RBP20.49■□□□□ 0.87
CCDC12-213ENST00000605875 GJA10Q969M2 543 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 CDCA3Q99618 268 aaPredicted RBP20.49■□□□□ 0.87
CCDC12-213ENST00000605875 PHF20Q9BVI0 1012 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 GJB4Q9NTQ9 266 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 GABBR1Q9UBS5 961 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 CEP131Q9UPN4 1083 aa20.49■□□□□ 0.87
CCDC12-213ENST00000605875 ZNF318Q5VUA4 2279 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 FSD2A1L4K1 749 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 FSCN2O14926 492 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 LAG3P18627 525 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 USP11P51784 963 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 NEK4P51957 841 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 CBX2Q14781 532 aaPredicted RBP20.48■□□□□ 0.87
CCDC12-213ENST00000605875 NONOQ15233 471 aaKnown RBP eCLIP20.48■□□□□ 0.878e-10■■■■□ 19.9
CCDC12-213ENST00000605875 DUSP6Q16828 381 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 GALNT17Q6IS24 598 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 KRT25Q7Z3Z0 450 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 PHF7Q9BWX1 381 aaPredicted RBP20.48■□□□□ 0.87
CCDC12-213ENST00000605875 ORC3Q9UBD5 711 aaPredicted RBP20.48■□□□□ 0.87
CCDC12-213ENST00000605875 SAMM50Q9Y512 469 aa20.48■□□□□ 0.87
CCDC12-213ENST00000605875 WDR64B1ANS9 1081 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 MAGEB2O15479 319 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 GAS7O60861 476 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 XBP1P17861 261 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 CLCN3P51790 818 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 NLRP11P59045 1033 aaKnown RBP20.47■□□□□ 0.87
CCDC12-213ENST00000605875 INF2Q27J81 1249 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 LRCH2Q5VUJ6 765 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 EFCAB12Q6NXP0 572 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 TRIM67Q6ZTA4 783 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 VN1R2Q8NFZ6 395 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 SLC5A5Q92911 643 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 RPGRIP1Q96KN7 1286 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 FAM167AQ96KS9 214 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 TEKT3Q9BXF9 490 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 TMEM117Q9H0C3 514 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 PUF60Q9UHX1 559 aaKnown RBP20.47■□□□□ 0.87
CCDC12-213ENST00000605875 AKT3Q9Y243 479 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 LZTS1Q9Y250 596 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 PIEZO1Q92508 2521 aa20.47■□□□□ 0.87
CCDC12-213ENST00000605875 TMEM221A6NGB7 291 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 M0R296 226 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 ZSCAN20P17040 1043 aaPredicted RBP20.46■□□□□ 0.87
CCDC12-213ENST00000605875 TMOD1P28289 359 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 ZXDAP98168 799 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 PLCB3Q01970 1234 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 C8orf34Q49A92 452 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 Q4G0T1 1027 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 PLPP4Q5VZY2 271 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 BMP8AQ7Z5Y6 402 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 OXER1Q8TDS5 423 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 MRPS27Q92552 414 aaKnown RBP20.46■□□□□ 0.87
CCDC12-213ENST00000605875 CASD1Q96PB1 797 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 MAP7D2Q96T17 732 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 RIT2Q99578 217 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 UNC45AQ9H3U1 944 aa20.46■□□□□ 0.87
CCDC12-213ENST00000605875 CCDC194A0A1B0GVG4 234 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 HOXA2O43364 376 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 SLC37A4O43826 429 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 JAK2O60674 1132 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 SRGAP2BP0DMP2 458 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 ATF7P17544 494 aaPredicted RBP20.45■□□□□ 0.86
CCDC12-213ENST00000605875 FOSBP53539 338 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 UGCGQ16739 394 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 LRRC55Q6ZSA7 311 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 LRRC71Q8N4P6 559 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 NSUN7Q8NE18 718 aaKnown RBP20.45■□□□□ 0.86
CCDC12-213ENST00000605875 SUSD6Q92537 303 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 WASF1Q92558 559 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 PBXIP1Q96AQ6 731 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 ADAMTS10Q9H324 1103 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 DISC1Q9NRI5 854 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 NRBP2Q9NSY0 501 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 RNF19AQ9NV58 838 aa20.45■□□□□ 0.86
CCDC12-213ENST00000605875 CYP3A7-CYP3A51PA0A087WV96 503 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms