RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 K7ELQ4 463 aaPredicted RBP21.46■■□□□ 1.03
SRSF4-206ENST00000605204 ENPP3O14638 875 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 STAG3L1P0CL83 205 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 PRPHP41219 470 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 NFX1Q12986 1120 aaKnown RBP21.46■■□□□ 1.03
SRSF4-206ENST00000605204 CTTNQ14247 550 aaKnown RBP21.46■■□□□ 1.03
SRSF4-206ENST00000605204 PLA2G4FQ68DD2 849 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 BRAPQ7Z569 592 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 MICALL1Q8N3F8 863 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 ATXN2LQ8WWM7 1075 aaKnown RBP21.46■■□□□ 1.03
SRSF4-206ENST00000605204 SAMD11Q96NU1 681 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 ASB2Q96Q27 587 aa21.46■■□□□ 1.03
SRSF4-206ENST00000605204 POLR3CQ9BUI4 534 aaPredicted RBP21.46■■□□□ 1.03
SRSF4-206ENST00000605204 INO80BQ9C086 356 aaPredicted RBP21.46■■□□□ 1.03
SRSF4-206ENST00000605204 NOC2LQ9Y3T9 749 aaKnown RBP21.46■■□□□ 1.03
SRSF4-206ENST00000605204 TMEM150BA6NC51 233 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 DARSP14868 501 aaKnown RBP21.45■■□□□ 1.02
SRSF4-206ENST00000605204 TOB1P50616 345 aaPredicted RBP21.45■■□□□ 1.02
SRSF4-206ENST00000605204 PDIA5Q14554 519 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 XKR9Q5GH70 373 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 NPAS4Q8IUM7 802 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 TMEM40Q8WWA1 233 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 NLRP7Q8WX94 980 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 PSPC1Q8WXF1 523 aaKnown RBP21.45■■□□□ 1.02
SRSF4-206ENST00000605204 SNX21Q969T3 373 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 GCOM2Q9BZD3 368 aaPredicted RBP21.45■■□□□ 1.02
SRSF4-206ENST00000605204 SUCLA2Q9P2R7 463 aaPredicted RBP21.45■■□□□ 1.02
SRSF4-206ENST00000605204 ST3GAL5Q9UNP4 418 aa21.45■■□□□ 1.02
SRSF4-206ENST00000605204 MICAL3Q7RTP6 2002 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 SIP14410 1827 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 DENND3A2RUS2 1198 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 DGAT1O75907 488 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 RPA1P27694 616 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 TECP42680 631 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 NPEPPSP55786 919 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 SPRED2Q7Z698 418 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 TMCO2Q7Z6W1 182 aaPredicted RBP21.44■■□□□ 1.02
SRSF4-206ENST00000605204 FAM228AQ86W67 206 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 NECAB3Q96P71 396 aaPredicted RBP21.44■■□□□ 1.02
SRSF4-206ENST00000605204 TGS1Q96RS0 853 aaKnown RBP21.44■■□□□ 1.02
SRSF4-206ENST00000605204 CDHR5Q9HBB8 845 aa21.44■■□□□ 1.02
SRSF4-206ENST00000605204 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.44■■□□□ 1.02
SRSF4-206ENST00000605204 LINC01553A4QN01 128 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 RFXAPO00287 272 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 ASAP2O43150 1006 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 BMP15O95972 392 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 PTGDRQ13258 359 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 EMC2Q15006 297 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 FAM117BQ6P1L5 589 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 SLC24A5Q71RS6 500 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 C4orf32Q8N8J7 132 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 NACC1Q96RE7 527 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 TMX1Q9H3N1 280 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 CERS4Q9HA82 394 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 RAPGEFL1Q9UHV5 662 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 RWDD3Q9Y3V2 267 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 PCDHB6Q9Y5E3 794 aa21.43■■□□□ 1.02
SRSF4-206ENST00000605204 LCHNA4D1U4 455 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 UPP2O95045 317 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 SFPQP23246 707 aaKnown RBP eCLIP21.42■■□□□ 1.02
SRSF4-206ENST00000605204 SARSP49591 514 aaKnown RBP21.42■■□□□ 1.02
SRSF4-206ENST00000605204 ERVK-21P61565 698 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 TFF2Q03403 129 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 MXD4Q14582 209 aaPredicted RBP21.42■■□□□ 1.02
SRSF4-206ENST00000605204 LINC01599Q8WXQ3 324 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 PPP1R16BQ96T49 567 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 MTRQ99707 1265 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 SH2D3AQ9BRG2 576 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 ATP6V0A4Q9HBG4 840 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 RGS18Q9NS28 235 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 DBR1Q9UK59 544 aaKnown RBP21.42■■□□□ 1.02
SRSF4-206ENST00000605204 COL4A3BPQ9Y5P4 624 aa21.42■■□□□ 1.02
SRSF4-206ENST00000605204 ADGRA3Q8IWK6 1321 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 SPATA31C1P0DKV0 1188 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 RARRES1P49788 294 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 DRP2Q13474 957 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 PCBP1Q15365 356 aaKnown RBP eCLIP21.41■■□□□ 1.02
SRSF4-206ENST00000605204 ARL6IP4Q66PJ3 421 aaKnown RBP21.41■■□□□ 1.02
SRSF4-206ENST00000605204 DTHD1Q6ZMT9 781 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 CATSPER3Q86XQ3 398 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 RHPN2Q8IUC4 686 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 IGSF22Q8N9C0 903 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 ADAM2Q99965 735 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 LRWD1Q9UFC0 647 aa21.41■■□□□ 1.02
SRSF4-206ENST00000605204 DGKIO75912 1065 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 PDIA4P13667 645 aaKnown RBP21.4■■□□□ 1.02
SRSF4-206ENST00000605204 ZSCAN20P17040 1043 aaPredicted RBP21.4■■□□□ 1.02
SRSF4-206ENST00000605204 POU3F3P20264 500 aaPredicted RBP21.4■■□□□ 1.02
SRSF4-206ENST00000605204 MRPS5P82675 430 aaKnown RBP21.4■■□□□ 1.02
SRSF4-206ENST00000605204 ATP2C1P98194 919 aaPredicted RBP21.4■■□□□ 1.02
SRSF4-206ENST00000605204 NBR1Q14596 966 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 HSCBQ8IWL3 235 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 CRIPAKQ8N1N5 446 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 KCTD17Q8N5Z5 321 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 MCPH1Q8NEM0 835 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 ARNTL2Q8WYA1 636 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 RSPH1Q8WYR4 309 aa21.4■■□□□ 1.02
SRSF4-206ENST00000605204 UHRF1Q96T88 793 aaPredicted RBP21.4■■□□□ 1.02
SRSF4-206ENST00000605204 ELAC1Q9H777 363 aaKnown RBP21.4■■□□□ 1.02
SRSF4-206ENST00000605204 RC3H2Q9HBD1 1191 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms