RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 POLR3GO15318 223 aaPredicted RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 SNX4O95219 450 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 FESP07332 822 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 GGCXP38435 758 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 UBXN1Q04323 297 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 PRKG1Q13976 671 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 KRT72Q14CN4 511 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 PCBP2Q15366 365 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 SURF1Q15526 300 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ALKBH5Q6P6C2 394 aaKnown RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ISLR2Q6UXK2 745 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 FAM196AQ6ZSG2 479 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ARMC9Q7Z3E5 817 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 KDELC2Q7Z4H8 507 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 DZIP1Q86YF9 867 aaKnown RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 OR8K1Q8NGG5 319 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 SPATA18Q8TC71 538 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 HDAC2Q92769 488 aaKnown RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 HPS1Q92902 700 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 CCDC138Q96M89 665 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 WDR24Q96S15 920 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 GPRC5BQ9NZH0 403 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 COQ3Q9NZJ6 369 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 HECAQ9UBI9 543 aaPredicted RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 WDR37Q9Y2I8 494 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 SQORQ9Y6N5 450 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 CASZ1Q86V15 1759 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 KRBA1A5PL33 1030 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ERC2O15083 957 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 DOK2O60496 412 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 KPNA6O60684 536 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 TADA3O75528 432 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 MTRF1O75570 445 aaKnown RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 GJB3O75712 270 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ADCY5O95622 1261 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 MYCP01106 439 aaPredicted RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ZKSCAN1P17029 563 aaPredicted RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 YY1P25490 414 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 RXRBP28702 533 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 EIF4A3P38919 411 aaKnown RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 LMAN1P49257 510 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 GJA9P57773 515 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 CENPCQ03188 943 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 LRRC74AQ0VAA2 488 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 SP140Q13342 867 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 NNTQ13423 1086 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 KIAA0753Q2KHM9 967 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ANO4Q32M45 955 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 HAUS3Q68CZ6 603 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 TATDN1Q6P1N9 297 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ARHGAP22Q7Z5H3 698 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 CCDC65Q8IXS2 484 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 MAB21L3Q8N8X9 362 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 C7orf57Q8NEG2 295 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ALKBH8Q96BT7 664 aaKnown RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 CABS1Q96KC9 395 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 LIN28AQ9H9Z2 209 aaKnown RBP5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 CRTAC1Q9NQ79 661 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 LMBRD1Q9NUN5 540 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 EDARQ9UNE0 448 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ELP1O95163 1332 aa5.49□□□□□ -1.53
SPTBN1-206ENST00000602898 ANKRD30BQ9BXX2 1392 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 MASP2O00187 686 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 NEMP1O14524 444 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 GRIN3BO60391 1043 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 COBLO75128 1261 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 SKAP2O75563 359 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 SLITRK5O94991 958 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CD2BP2O95400 341 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CNOT4O95628 575 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 PHKG2P15735 406 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 RPL13P26373 211 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CCNFP41002 786 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ZAP70P43403 619 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 FXR1P51114 621 aaKnown RBP eCLIP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CLNS1AP54105 237 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 NAA25Q14CX7 972 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CWC27Q6UX04 472 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 KDF1Q8NAX2 398 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ATP11CQ8NB49 1132 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ERMNQ8TAM6 284 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ADAMTS18Q8TE60 1221 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ZKSCAN4Q969J2 545 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 DTNBP1Q96EV8 351 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 MPHOSPH8Q99549 860 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 TAOK3Q9H2K8 898 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ACTR10Q9NZ32 417 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 RIMKLBQ9ULI2 386 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 EXOC6BQ9Y2D4 811 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ATP6V0A2Q9Y487 856 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 MRFAP1Q9Y605 127 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 BRWD3Q6RI45 1802 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 NUP188Q5SRE5 1749 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ZSCAN5CA6NGD5 496 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 M0QX08 132 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 HOXC11O43248 304 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 LILRA1O75019 489 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ATP6V1G1O75348 118 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 MBD3O95983 291 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms