RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MRPS27Q92552 414 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 PRRX2Q99811 253 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 PHF7Q9BWX1 381 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 DACT1Q9NYF0 836 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 HCSTQ9UBK5 93 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 AKT3Q9Y243 479 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 VTNP04004 478 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 OATP04181 439 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 HOXB8P17481 243 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 GALNT17Q6IS24 598 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 TRIM22Q8IYM9 498 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 LINC01465Q8N7H1 131 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 PRSS33Q8NF86 280 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 CCDC136Q96JN2 1154 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 ADAMTS10Q9H324 1103 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 CWH43Q9H720 699 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 CHST12Q9NRB3 414 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 SNX14Q9Y5W7 946 aa20.11■□□□□ 0.81
SHKBP1-227ENST00000602011 PLXNA4Q9HCM2 1894 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 FSCN2O14926 492 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 PER2O15055 1255 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 GAS7O60861 476 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 DNM2P50570 870 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 LRRC43Q8N309 656 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 SLC5A5Q92911 643 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 LENG9Q96B70 501 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 TEKT3Q9BXF9 490 aa20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 INO80BQ9C086 356 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-227ENST00000602011 A0A0U1RQF3 1178 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 MSH4O15457 936 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 SKIP12755 728 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 NLRP5P59047 1200 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 TBC1D8BQ0IIM8 1120 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 Q4G0T1 1027 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 KCNT2Q6UVM3 1135 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 ECHDC2Q86YB7 292 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 PHKBQ93100 1093 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 ZNF558Q96NG5 402 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 CASD1Q96PB1 797 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 SLC26A6Q9BXS9 759 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 MRPL9Q9BYD2 267 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 NIFKQ9BYG3 293 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 SPG21Q9NZD8 308 aa20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 USP15Q9Y4E8 981 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-227ENST00000602011 CYP3A7-CYP3A51PA0A087WV96 503 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 TMEM221A6NGB7 291 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 M0R296 226 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 DARSP14868 501 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 CYP3A7P24462 503 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 PDIA3P30101 505 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 GPC3P51654 580 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 CLCN3P51790 818 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 ERVFC1P60507 584 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 XKR3Q5GH77 459 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 LRCH2Q5VUJ6 765 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 CPLX2Q6PUV4 134 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 MOXD1Q6UVY6 613 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 TRIM67Q6ZTA4 783 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 TRMT1LQ7Z2T5 733 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 EXOC8Q8IYI6 725 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 VN1R2Q8NFZ6 395 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 SUSD6Q92537 303 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 PBXIP1Q96AQ6 731 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 JPH2Q9BR39 696 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 GCOM2Q9BZD3 368 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-227ENST00000602011 ZNF862O60290 1169 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 FGFR1P11362 822 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 CPA1P15085 419 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 PRKCEQ02156 737 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 SSRP1Q08945 709 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 KCNC3Q14003 757 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 TARBP2Q15633 366 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 RPGRIP1Q96KN7 1286 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 PPP1R16BQ96T49 567 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 PCDHA4Q9UN74 947 aa20.07■□□□□ 0.8
SHKBP1-227ENST00000602011 ZDBF2Q9HCK1 2354 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 DKC1O60832 514 aaKnown RBP eCLIP20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 PSMD10O75832 226 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 ALDH7A1P49419 539 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 ZXDAP98168 799 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 TMC7Q7Z402 723 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 NLRP7Q8WX94 980 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 ZNF274Q96GC6 653 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 SCLT1Q96NL6 688 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 TCF25Q9BQ70 676 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 ENTPD7Q9NQZ7 604 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 VPS54Q9P1Q0 977 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 STK39Q9UEW8 545 aa20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 MYH9P35579 1960 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-227ENST00000602011 EVPLQ92817 2033 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 CPLX1O14810 134 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 DEXIO95424 95 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 GIT2Q14161 759 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 TPRNQ4KMQ1 711 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 ANKRD54Q6NXT1 300 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 LRRC55Q6ZSA7 311 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 MIER3Q7Z3K6 550 aa20.05■□□□□ 0.8
SHKBP1-227ENST00000602011 ZNF410Q86VK4 478 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms