RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TMEM161AQ9NX61 479 aa25.44■■□□□ 1.66
SSBP4-209ENST00000601357 BDP1A6H8Y1 2624 aa25.43■■□□□ 1.66
SSBP4-209ENST00000601357 MAFO75444 373 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-209ENST00000601357 QARSP47897 775 aaKnown RBP25.43■■□□□ 1.66
SSBP4-209ENST00000601357 CAMK1Q14012 370 aa25.43■■□□□ 1.66
SSBP4-209ENST00000601357 ZNF668Q96K58 619 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-209ENST00000601357 WRAP73Q9P2S5 460 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-209ENST00000601357 PLAGL2Q9UPG8 496 aa25.43■■□□□ 1.66
SSBP4-209ENST00000601357 DDX11L8A8MPP1 907 aa25.42■■□□□ 1.66
SSBP4-209ENST00000601357 P4HBP07237 508 aaKnown RBP25.42■■□□□ 1.66
SSBP4-209ENST00000601357 LEXMQ3ZCV2 418 aa25.42■■□□□ 1.66
SSBP4-209ENST00000601357 FAM102BQ5T8I3 360 aa25.42■■□□□ 1.66
SSBP4-209ENST00000601357 LIMCH1Q9UPQ0 1083 aa25.42■■□□□ 1.66
SSBP4-209ENST00000601357 PLXNA4Q9HCM2 1894 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 BTBD18B2RXH4 712 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 ITGB1P05556 798 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 KCNA5P22460 613 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 CDC42EP1Q00587 391 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 EPHA7Q15375 998 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 C8orf34Q49A92 452 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 PLA2G4FQ68DD2 849 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 DIS3L2Q8IYB7 885 aaKnown RBP25.41■■□□□ 1.66
SSBP4-209ENST00000601357 SLFN12Q8IYM2 578 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 NEK9Q8TD19 979 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 NLRP7Q8WX94 980 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 PABPC5Q96DU9 382 aaKnown RBP25.41■■□□□ 1.66
SSBP4-209ENST00000601357 KIF2CQ99661 725 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 ALG13Q9NP73 1137 aaKnown RBP25.41■■□□□ 1.66
SSBP4-209ENST00000601357 CYP26B1Q9NR63 512 aa25.41■■□□□ 1.66
SSBP4-209ENST00000601357 DKC1O60832 514 aaKnown RBP eCLIP25.4■■□□□ 1.66
SSBP4-209ENST00000601357 DNAJB1P25685 340 aa25.4■■□□□ 1.66
SSBP4-209ENST00000601357 DNM2P50570 870 aa25.4■■□□□ 1.66
SSBP4-209ENST00000601357 KLHL23Q8NBE8 558 aa25.4■■□□□ 1.66
SSBP4-209ENST00000601357 ATP6V0A4Q9HBG4 840 aa25.4■■□□□ 1.66
SSBP4-209ENST00000601357 ARID2Q68CP9 1835 aa25.4■■□□□ 1.66
SSBP4-209ENST00000601357 NCOR1O75376 2440 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 TBKBP1A7MCY6 615 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 FGFR1P11362 822 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 IBSPP21815 317 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-209ENST00000601357 C4orf19Q8IY42 314 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 ZNF579Q8NAF0 562 aaKnown RBP25.39■■□□□ 1.66
SSBP4-209ENST00000601357 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-209ENST00000601357 SPPL3Q8TCT6 385 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 SCLT1Q96NL6 688 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 RNF19AQ9NV58 838 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 PPME1Q9Y570 386 aa25.39■■□□□ 1.66
SSBP4-209ENST00000601357 WNT7AO00755 349 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 BAG4O95429 457 aaKnown RBP25.38■■□□□ 1.65
SSBP4-209ENST00000601357 ZSCAN20P17040 1043 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-209ENST00000601357 FGFR4P22455 802 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 NPEPPSP55786 919 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 TRIM29Q14134 588 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 CTC1Q2NKJ3 1217 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 ZNF410Q86VK4 478 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 JPH2Q9BR39 696 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-209ENST00000601357 LXNQ9BS40 222 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 GCOM2Q9BZD3 368 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-209ENST00000601357 DHX33Q9H6R0 707 aaKnown RBP25.38■■□□□ 1.65
SSBP4-209ENST00000601357 SUCLA2Q9P2R7 463 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-209ENST00000601357 MYO7AQ13402 2215 aa25.38■■□□□ 1.65
SSBP4-209ENST00000601357 A0A087WZ62 844 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 NCK2O43639 380 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 MARCH6O60337 910 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 CSDE1O75534 798 aaKnown RBP25.37■■□□□ 1.65
SSBP4-209ENST00000601357 HYAL1Q12794 435 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 NCAPH2Q6IBW4 605 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 ECHDC2Q86YB7 292 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 FDXACB1Q9BRP7 624 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-209ENST00000601357 CWH43Q9H720 699 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 TYW1Q9NV66 732 aaKnown RBP25.37■■□□□ 1.65
SSBP4-209ENST00000601357 RGL1Q9NZL6 768 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 HCSTQ9UBK5 93 aa25.37■■□□□ 1.65
SSBP4-209ENST00000601357 A0A0U1RQF3 1178 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 LTBRP36941 435 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 FOSBP53539 338 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 ZNF598Q86UK7 904 aaKnown RBP25.36■■□□□ 1.65
SSBP4-209ENST00000601357 RHPN2Q8IUC4 686 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 CCDC83Q8IWF9 413 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 SLC7A3Q8WY07 619 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 DYDC2Q96IM9 177 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 CEP170P1Q96L14 293 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 CASD1Q96PB1 797 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 LLPHQ9BRT6 129 aaKnown RBP25.36■■□□□ 1.65
SSBP4-209ENST00000601357 TMEM117Q9H0C3 514 aa25.36■■□□□ 1.65
SSBP4-209ENST00000601357 HOXA2O43364 376 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 NEMFO60524 1076 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 SLITRK3O94933 977 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 YWHABP31946 246 aaKnown RBP25.35■■□□□ 1.65
SSBP4-209ENST00000601357 RFC5P40937 340 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 CALCRLQ16602 461 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 KSR1Q8IVT5 923 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 POF1BQ8WVV4 589 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 MTMR9Q96QG7 549 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 TRAIPQ9BWF2 469 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 ZSWIM4Q9H7M6 989 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 IFT122Q9HBG6 1241 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 CHST12Q9NRB3 414 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 AAASQ9NRG9 546 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 PCDHA12Q9UN75 941 aa25.35■■□□□ 1.65
SSBP4-209ENST00000601357 PCDHB12Q9Y5F1 795 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms