RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 UPF3AQ9H1J1 476 aaKnown RBP24.92■■□□□ 1.58
IRF3-228ENST00000601291 FANCLQ9NW38 375 aa24.92■■□□□ 1.58
IRF3-228ENST00000601291 TRIM49BA6NDI0 452 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 ZBTB42B2RXF5 422 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 KPNA6O60684 536 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 MYL3P08590 195 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 INSRRP14616 1297 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 PEX3P56589 373 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 LRRC63Q05C16 580 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 BMT2Q1RMZ1 405 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 TCP11Q8WWU5 503 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 KATNAL1Q9BW62 490 aa24.91■■□□□ 1.58
IRF3-228ENST00000601291 GRK4P32298 578 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 PMS1P54277 932 aaKnown RBP24.9■■□□□ 1.58
IRF3-228ENST00000601291 SOX10P56693 466 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 BEX3Q00994 111 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 TTI2Q6NXR4 508 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 FOXR2Q6PJQ5 311 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 NELFCDQ8IXH7 590 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 ZNF507Q8TCN5 953 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 SPIRE2Q8WWL2 714 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 SEMA6BQ9H3T3 888 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 XPNPEP3Q9NQH7 507 aa24.9■■□□□ 1.58
IRF3-228ENST00000601291 CCDC169A6NNP5 214 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 ZEB2O60315 1214 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 INHAP05111 366 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 NCKAP1LP55160 1127 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 PPFIA1Q13136 1202 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 PPP2R5AQ15172 486 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 KNOP1Q1ED39 458 aaKnown RBP24.89■■□□□ 1.58
IRF3-228ENST00000601291 ANKRD40Q6AI12 368 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 RETREG2Q8NC44 543 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 NOC3LQ8WTT2 800 aaKnown RBP24.89■■□□□ 1.58
IRF3-228ENST00000601291 TMEM143Q96AN5 459 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 ST6GALNAC4Q9H4F1 302 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 PTCH2Q9Y6C5 1203 aa24.89■■□□□ 1.58
IRF3-228ENST00000601291 MYH11P35749 1972 aa24.89■■□□□ 1.57
IRF3-228ENST00000601291 IGKV6-21A0A0C4DH24 114 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 H0YCG3 227 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 MAGEB2O15479 319 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 PRPF6O94906 941 aaKnown RBP24.88■■□□□ 1.57
IRF3-228ENST00000601291 NPTX2P47972 431 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 IGBP1P78318 339 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 NKX3-2P78367 333 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 MFSD10Q14728 455 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 IER5Q5VY09 327 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 PPP4R3CPQ6ZMV5 832 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 CSGALNACT2Q8N6G5 542 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 HSD3B7Q9H2F3 369 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 KMT5AQ9NQR1 393 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 DDX20Q9UHI6 824 aaKnown RBP24.88■■□□□ 1.57
IRF3-228ENST00000601291 ABCD1P33897 745 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 ARL2P36404 184 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 DNM2P50570 870 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 IRX5P78411 483 aaPredicted RBP24.88■■□□□ 1.57
IRF3-228ENST00000601291 KIAA0753Q2KHM9 967 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 ZC2HC1CQ53FD0 456 aaPredicted RBP24.88■■□□□ 1.57
IRF3-228ENST00000601291 GNASQ5JWF2 1037 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 SARM1Q6SZW1 724 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 HAUS6Q7Z4H7 955 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 DNAJC5GQ8N7S2 189 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 TRAPPC12Q8WVT3 735 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 KAT2BQ92831 832 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 NTPCRQ9BSD7 190 aaKnown RBP24.88■■□□□ 1.57
IRF3-228ENST00000601291 SUGCTQ9HAC7 445 aa24.88■■□□□ 1.57
IRF3-228ENST00000601291 RRN3P2A6NIE6 340 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 SLC16A4O15374 487 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 MSCO60682 206 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 C22orf31O95567 290 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 PGK1P00558 417 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 CDK11BP21127 795 aaKnown RBP24.87■■□□□ 1.57
IRF3-228ENST00000601291 SCP2P22307 547 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 PSEN2P49810 448 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 PURAQ00577 322 aaKnown RBP24.87■■□□□ 1.57
IRF3-228ENST00000601291 GRIK4Q16099 956 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 BSNDQ8WZ55 320 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 HVCN1Q96D96 273 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 STRA6Q9BX79 667 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 KCTD10Q9H3F6 313 aa24.87■■□□□ 1.57
IRF3-228ENST00000601291 SAMSN1Q9NSI8 373 aaKnown RBP24.87■■□□□ 1.57
IRF3-228ENST00000601291 MYADML2A6NDP7 307 aa24.86■■□□□ 1.57
IRF3-228ENST00000601291 PPP1R37O75864 691 aa24.86■■□□□ 1.57
IRF3-228ENST00000601291 FGFR1OPO95684 399 aaKnown RBP24.86■■□□□ 1.57
IRF3-228ENST00000601291 ZNF18P17022 549 aa24.86■■□□□ 1.57
IRF3-228ENST00000601291 NAMPTP43490 491 aa24.86■■□□□ 1.57
IRF3-228ENST00000601291 ZCWPW2Q504Y3 356 aa24.86■■□□□ 1.57
IRF3-228ENST00000601291 PSPC1Q8WXF1 523 aaKnown RBP24.86■■□□□ 1.57
IRF3-228ENST00000601291 DUSP9Q99956 384 aaKnown RBP24.86■■□□□ 1.57
IRF3-228ENST00000601291 THAP9Q9H5L6 903 aa24.86■■□□□ 1.57
IRF3-228ENST00000601291 TMEM206Q9H813 350 aa24.86■■□□□ 1.57
IRF3-228ENST00000601291 HMX1Q9NP08 348 aaPredicted RBP24.86■■□□□ 1.57
IRF3-228ENST00000601291 TYW1Q9NV66 732 aaKnown RBP24.86■■□□□ 1.57
IRF3-228ENST00000601291 PDXKO00764 312 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 CALUO43852 315 aaPredicted RBP24.85■■□□□ 1.57
IRF3-228ENST00000601291 ADAMTS4O75173 837 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 GLRA2P23416 452 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 CHMP4BP1P59074 171 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 GTF2BQ00403 316 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 SPAG1Q07617 926 aa24.85■■□□□ 1.57
IRF3-228ENST00000601291 MXD4Q14582 209 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms