RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 NT5C1B-RDH14C9J2C7 533 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 MAGEB2O15479 319 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 HOXA2O43364 376 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 ZNF862O60290 1169 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 PDGFBP01127 241 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-206ENST00000601154 WEE2P0C1S8 567 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 EIF4BP23588 611 aaKnown RBP9.41□□□□□ -0.9
CCDC9-206ENST00000601154 TMOD1P28289 359 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 PPM1AP35813 382 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 GPC3P51654 580 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 FAM189BP81408 668 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 PLCB3Q01970 1234 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 KRT17Q04695 432 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 TCF15Q12870 199 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 KRT32Q14532 448 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 UGCGQ16739 394 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 LONRF3Q496Y0 759 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 BMP2KLQ5H9B9 411 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 CLLU1OSQ5K130 101 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 PDE12Q6L8Q7 609 aaKnown RBP9.41□□□□□ -0.9
CCDC9-206ENST00000601154 Q6ZUG5 572 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 ECHDC2Q86YB7 292 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 CCDC12Q8WUD4 166 aaPredicted RBP9.41□□□□□ -0.9
CCDC9-206ENST00000601154 NLRP7Q8WX94 980 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 BRF1Q92994 677 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 ASIC4Q96FT7 647 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 FAM167AQ96KS9 214 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 JAKMIP1Q96N16 626 aaKnown RBP9.41□□□□□ -0.9
CCDC9-206ENST00000601154 ZMYND12Q9H0C1 365 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 ADAMTS10Q9H324 1103 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 NGRNQ9NPE2 291 aaKnown RBP9.41□□□□□ -0.9
CCDC9-206ENST00000601154 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 SPG21Q9NZD8 308 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 LZTS1Q9Y250 596 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 HCFC2Q9Y5Z7 792 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 ZNF318Q5VUA4 2279 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 WDFY4Q6ZS81 3184 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 TMEM150BA6NC51 233 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 MSH4O15457 936 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 DARSP14868 501 aaKnown RBP9.4□□□□□ -0.9
CCDC9-206ENST00000601154 GNA11P29992 359 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 AKAP17AQ02040 695 aaKnown RBP9.4□□□□□ -0.9
CCDC9-206ENST00000601154 TBC1D8BQ0IIM8 1120 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 DRP2Q13474 957 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 KCNC3Q14003 757 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 SMC1AQ14683 1233 aaKnown RBP9.4□□□□□ -0.9
CCDC9-206ENST00000601154 PKN1Q16512 942 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 MTERF2Q49AM1 385 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 TMEM184AQ6ZMB5 413 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 SLC39A11Q8N1S5 342 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 LINC01465Q8N7H1 131 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 C12orf76Q8N812 135 aaPredicted RBP9.4□□□□□ -0.9
CCDC9-206ENST00000601154 KREMEN2Q8NCW0 462 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 AUTS2Q8WXX7 1259 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 CASP10Q92851 521 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 LENG9Q96B70 501 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 CCDC136Q96JN2 1154 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 SH2D3AQ9BRG2 576 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 SLC26A6Q9BXS9 759 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 UNC45AQ9H3U1 944 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 SMOC2Q9H3U7 446 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 POMKQ9H5K3 350 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 NRBP2Q9NSY0 501 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
CCDC9-206ENST00000601154 SEPT9Q9UHD8 586 aaPredicted RBP9.4□□□□□ -0.9
CCDC9-206ENST00000601154 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 C2orf71A6NGG8 1288 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 C2CD4DB7Z1M9 353 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 GAS7O60861 476 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 ZC3H11AO75152 810 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 CDC45O75419 566 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 HMGB1P09429 215 aaKnown RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 HOXB8P17481 243 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 AVPR2P30518 371 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 CIITAP33076 1130 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 RCAN1P53805 252 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 BCAR1P56945 870 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 CCT2P78371 535 aaKnown RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 TPRNQ4KMQ1 711 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 RARS2Q5T160 578 aaKnown RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 LRCH2Q5VUJ6 765 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 MCTP2Q6DN12 878 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 CES5AQ6NT32 575 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 FAM43BQ6ZT52 329 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 TMEM173Q86WV6 379 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 TMEM87AQ8NBN3 555 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 ATOH1Q92858 354 aaPredicted RBP9.39□□□□□ -0.91
CCDC9-206ENST00000601154 LPPQ93052 612 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 TMEM169Q96HH4 297 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 PRRX2Q99811 253 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 TEKT3Q9BXF9 490 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 GBP3Q9H0R5 595 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 INPP5FQ9Y2H2 1132 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 LOXHD1Q8IVV2 1947 aa9.39□□□□□ -0.91
CCDC9-206ENST00000601154 FNDC1Q4ZHG4 1894 aaPredicted RBP9.38□□□□□ -0.91
CCDC9-206ENST00000601154 A0A087WZ62 844 aa9.38□□□□□ -0.91
CCDC9-206ENST00000601154 A0A0U1RQF3 1178 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms