RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 V9GY48 417 aaPredicted RBP19.03■□□□□ 0.64
USE1-208ENST00000600970 hCG_1984214I3L0E3 225 aa19.02■□□□□ 0.64
USE1-208ENST00000600970 CLASP2O75122 1294 aaKnown RBP19.02■□□□□ 0.64
USE1-208ENST00000600970 NECTIN1Q15223 517 aa19.02■□□□□ 0.64
USE1-208ENST00000600970 CREB3L3Q68CJ9 461 aa19.02■□□□□ 0.64
USE1-208ENST00000600970 SLC39A11Q8N1S5 342 aa19.02■□□□□ 0.64
USE1-208ENST00000600970 ZNF713Q8N859 430 aaPredicted RBP19.02■□□□□ 0.64
USE1-208ENST00000600970 ADAMTS10Q9H324 1103 aa19.02■□□□□ 0.64
USE1-208ENST00000600970 AKT3Q9Y243 479 aa19.02■□□□□ 0.64
USE1-208ENST00000600970 MAGEB2O15479 319 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 CYP3A4P08684 503 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 WEE2P0C1S8 567 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 EIF4BP23588 611 aaKnown RBP19.01■□□□□ 0.63
USE1-208ENST00000600970 NBL1P41271 181 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 MTHFRP42898 656 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 JAKMIP3Q5VZ66 844 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 ZNF746Q6NUN9 644 aaPredicted RBP19.01■□□□□ 0.63
USE1-208ENST00000600970 EFCAB12Q6NXP0 572 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 LINC01465Q8N7H1 131 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 RNF169Q8NCN4 708 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 CRYGNQ8WXF5 182 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 ZNF577Q9BSK1 485 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 GLT8D2Q9H1C3 349 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 TBC1D22BQ9NU19 505 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 CEP131Q9UPN4 1083 aa19.01■□□□□ 0.63
USE1-208ENST00000600970 PRR23AA6NEV1 266 aa19■□□□□ 0.63
USE1-208ENST00000600970 NT5C1B-RDH14C9J2C7 533 aa19■□□□□ 0.63
USE1-208ENST00000600970 ASGR2P07307 311 aa19■□□□□ 0.63
USE1-208ENST00000600970 METAP2P50579 478 aaKnown RBP eCLIP19■□□□□ 0.63
USE1-208ENST00000600970 RTN1Q16799 776 aa19■□□□□ 0.63
USE1-208ENST00000600970 RARS2Q5T160 578 aaKnown RBP19■□□□□ 0.63
USE1-208ENST00000600970 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
USE1-208ENST00000600970 ZDHHC14Q8IZN3 488 aa19■□□□□ 0.63
USE1-208ENST00000600970 LRRC71Q8N4P6 559 aa19■□□□□ 0.63
USE1-208ENST00000600970 ZNF668Q96K58 619 aaPredicted RBP19■□□□□ 0.63
USE1-208ENST00000600970 MAP7D2Q96T17 732 aa19■□□□□ 0.63
USE1-208ENST00000600970 GABBR1Q9UBS5 961 aa19■□□□□ 0.63
USE1-208ENST00000600970 DMDP11532 3685 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 DENND4AQ7Z401 1863 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 A0A0U1RQF3 1178 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 CXCL14O95715 111 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 EOMESO95936 686 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 PSAPP07602 524 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 CA8P35219 290 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 BCAR1P56945 870 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 FOXK2Q01167 660 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 ASTLQ6HA08 431 aaPredicted RBP18.99■□□□□ 0.63
USE1-208ENST00000600970 KANK3Q6NY19 840 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 ZNF598Q86UK7 904 aaKnown RBP18.99■□□□□ 0.63
USE1-208ENST00000600970 C12orf76Q8N812 135 aaPredicted RBP18.99■□□□□ 0.63
USE1-208ENST00000600970 HELQQ8TDG4 1101 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 LIMD1Q9UGP4 676 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 BRPF3Q9ULD4 1205 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 PCDHA10Q9Y5I2 948 aa18.99■□□□□ 0.63
USE1-208ENST00000600970 ADAMTS3O15072 1205 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 ZBTB43O43298 467 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 FGFR4P22455 802 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 TMOD1P28289 359 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 GPC3P51654 580 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 SETQ01105 290 aaPredicted RBP18.98■□□□□ 0.63
USE1-208ENST00000600970 KIAA1841Q6NSI8 718 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 ZNF710Q8N1W2 664 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 TDRD5Q8NAT2 981 aaKnown RBP18.98■□□□□ 0.63
USE1-208ENST00000600970 FAM167AQ96KS9 214 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 ESYT1Q9BSJ8 1104 aa18.98■□□□□ 0.63
USE1-208ENST00000600970 DARSP14868 501 aaKnown RBP18.97■□□□□ 0.63
USE1-208ENST00000600970 ALDH7A1P49419 539 aaKnown RBP18.97■□□□□ 0.63
USE1-208ENST00000600970 BMS1Q14692 1282 aaKnown RBP18.97■□□□□ 0.63
USE1-208ENST00000600970 VPS52Q8N1B4 723 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 PLCD3Q8N3E9 789 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 AUTS2Q8WXX7 1259 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 TMEM169Q96HH4 297 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 TCEANC2Q96MN5 208 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 MRPL9Q9BYD2 267 aaKnown RBP18.97■□□□□ 0.63
USE1-208ENST00000600970 ZBP1Q9H171 429 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 MFSD1Q9H3U5 465 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 FAM217BQ9NTX9 383 aaPredicted RBP18.97■□□□□ 0.63
USE1-208ENST00000600970 DZANK1Q9NVP4 752 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
USE1-208ENST00000600970 DBR1Q9UK59 544 aaKnown RBP18.97■□□□□ 0.63
USE1-208ENST00000600970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.96■□□□□ 0.63
USE1-208ENST00000600970 ZNF862O60290 1169 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 EPCAMP16422 314 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 CDC27P30260 824 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 CLCN5P51795 746 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 EXOSC10Q01780 885 aaKnown RBP18.96■□□□□ 0.63
USE1-208ENST00000600970 ATAT1Q5SQI0 421 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 FEZF2Q8TBJ5 459 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 DACT1Q9NYF0 836 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 USTQ9Y2C2 406 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 SAMM50Q9Y512 469 aa18.96■□□□□ 0.63
USE1-208ENST00000600970 GOLGA8AA7E2F4 631 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 GOLGA8BA8MQT2 603 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 OATP04181 439 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 CTSAP10619 480 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 PFKFB3Q16875 520 aaPredicted RBP18.95■□□□□ 0.62
USE1-208ENST00000600970 PRR16Q569H4 304 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 MCTP2Q6DN12 878 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 FRMD5Q7Z6J6 570 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 TMEM173Q86WV6 379 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms