RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
RPS28-203ENST00000600659 PIGOQ8TEQ8 1089 aa17.6■□□□□ 0.41
RPS28-203ENST00000600659 BMP2KQ9NSY1 1161 aaPredicted RBP17.6■□□□□ 0.41
RPS28-203ENST00000600659 ANKEF1Q9NU02 776 aa17.6■□□□□ 0.41
RPS28-203ENST00000600659 ST3GAL5Q9UNP4 418 aa17.6■□□□□ 0.41
RPS28-203ENST00000600659 PRUNE2Q8WUY3 3088 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 VPS37CA5D8V6 355 aaPredicted RBP17.59■□□□□ 0.41
RPS28-203ENST00000600659 PP2D1A8MPX8 630 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 DARSP14868 501 aaKnown RBP17.59■□□□□ 0.41
RPS28-203ENST00000600659 RFC5P40937 340 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 XKR9Q5GH70 373 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 PPP2R2DQ66LE6 453 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 BRAPQ7Z569 592 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 MYLIPQ8WY64 445 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 RAD9AQ99638 391 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 MMTAG2Q9BU76 263 aaKnown RBP17.59■□□□□ 0.41
RPS28-203ENST00000600659 FTHL17Q9BXU8 183 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 SLC28A3Q9HAS3 691 aa17.59■□□□□ 0.41
RPS28-203ENST00000600659 LINC00271P0C7V0 271 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPS28-203ENST00000600659 PDCP20941 246 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 EIF4BP23588 611 aaKnown RBP17.58■□□□□ 0.4
RPS28-203ENST00000600659 POLGP54098 1239 aaPredicted RBP17.58■□□□□ 0.4
RPS28-203ENST00000600659 NFX1Q12986 1120 aaKnown RBP17.58■□□□□ 0.4
RPS28-203ENST00000600659 PDIA5Q14554 519 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 OTUD6AQ7L8S5 288 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 SLC7A3Q8WY07 619 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 TMEM143Q96AN5 459 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 IFT122Q9HBG6 1241 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 SUCLA2Q9P2R7 463 aaPredicted RBP17.58■□□□□ 0.4
RPS28-203ENST00000600659 STXBP5LQ9Y2K9 1186 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 REV3LO60673 3130 aa17.58■□□□□ 0.4
RPS28-203ENST00000600659 PRRC2BQ5JSZ5 2229 aaKnown RBP17.57■□□□□ 0.4
RPS28-203ENST00000600659 A0A087WZ62 844 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 LINC01553A4QN01 128 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 CSDE1O75534 798 aaKnown RBP17.57■□□□□ 0.4
RPS28-203ENST00000600659 UPP2O95045 317 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 FGFR4P22455 802 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 ADGRE1Q14246 886 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 FAM173BQ6P4H8 233 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 RHPN2Q8IUC4 686 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 ZNF689Q96CS4 500 aaPredicted RBP17.57■□□□□ 0.4
RPS28-203ENST00000600659 MTRQ99707 1265 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 JPH2Q9BR39 696 aaPredicted RBP17.57■□□□□ 0.4
RPS28-203ENST00000600659 FDXACB1Q9BRP7 624 aaPredicted RBP17.57■□□□□ 0.4
RPS28-203ENST00000600659 PRDM12Q9H4Q4 367 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 DBR1Q9UK59 544 aaKnown RBP17.57■□□□□ 0.4
RPS28-203ENST00000600659 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
RPS28-203ENST00000600659 C9IYK1 514 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 GPR182O15218 404 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 GAS2O43903 313 aaKnown RBP17.56■□□□□ 0.4
RPS28-203ENST00000600659 MUTP22033 750 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 CDC25AP30304 524 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 GRIN1Q05586 938 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 ZNF410Q86VK4 478 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 HSCBQ8IWL3 235 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 ERMNQ8TAM6 284 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 NLRP7Q8WX94 980 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 ZBED2Q9BTP6 218 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 MINDY3Q9H8M7 445 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 RGS18Q9NS28 235 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 INSL6Q9Y581 213 aa17.56■□□□□ 0.4
RPS28-203ENST00000600659 STX6O43752 255 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 DGAT1O75907 488 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 ARL2P36404 184 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 DNM2P50570 870 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 LAMTOR4Q0VGL1 99 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 PTPAQ15257 358 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 ARL6IP4Q66PJ3 421 aaKnown RBP17.55■□□□□ 0.4
RPS28-203ENST00000600659 HAUS3Q68CZ6 603 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 DTHD1Q6ZMT9 781 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 ASAP3Q8TDY4 903 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 SNX29Q8TEQ0 813 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 PRPF31Q8WWY3 499 aaKnown RBP17.55■□□□□ 0.4
RPS28-203ENST00000600659 PSPC1Q8WXF1 523 aaKnown RBP17.55■□□□□ 0.4
RPS28-203ENST00000600659 NLRP4Q96MN2 994 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 ADAM2Q99965 735 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 CERS4Q9HA82 394 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 ATP6V0A4Q9HBG4 840 aa17.55■□□□□ 0.4
RPS28-203ENST00000600659 RFXAPO00287 272 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 USO1O60763 962 aaKnown RBP17.54■□□□□ 0.4
RPS28-203ENST00000600659 DGKIO75912 1065 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 CCT6AP40227 531 aaKnown RBP17.54■□□□□ 0.4
RPS28-203ENST00000600659 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
RPS28-203ENST00000600659 ERVK-21P61565 698 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 SF3A1Q15459 793 aaKnown RBP17.54■□□□□ 0.4
RPS28-203ENST00000600659 HYIQ5T013 277 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 FAM43BQ6ZT52 329 aaPredicted RBP17.54■□□□□ 0.4
RPS28-203ENST00000600659 KCNK18Q7Z418 384 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 EXOC8Q8IYI6 725 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 LRRC15Q8TF66 581 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 PNMA5Q96PV4 448 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 GCOM2Q9BZD3 368 aaPredicted RBP17.54■□□□□ 0.4
RPS28-203ENST00000600659 GPRC5CQ9NQ84 441 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 ADGRA3Q8IWK6 1321 aa17.54■□□□□ 0.4
RPS28-203ENST00000600659 LPXNO60711 386 aa17.53■□□□□ 0.4
RPS28-203ENST00000600659 GLRA2P23416 452 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms