RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DYMQ7RTS9 669 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 RPAINQ86UA6 219 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 EXOC8Q8IYI6 725 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 C7orf61Q8IZ16 206 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 CNNM3Q8NE01 707 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 ASAP3Q8TDY4 903 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 PAGE5Q96GU1 130 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 ZNF668Q96K58 619 aaPredicted RBP22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 PPP1R16BQ96T49 567 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 REEP2Q9BRK0 252 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 NOC4LQ9BVI4 516 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 MAGEF1Q9HAY2 307 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 TMEM39AQ9NV64 488 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 TRIM43BA6NCK2 446 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 GLRA2P23416 452 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 TMOD1P28289 359 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 THPOP40225 353 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 RBL2Q08999 1139 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 KSR1Q8IVT5 923 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 GPT2Q8TD30 523 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 TCP11Q8WWU5 503 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 BSNDQ8WZ55 320 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 DDX12PQ92771 950 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 TRIM43Q96BQ3 446 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 DNAJC19Q96DA6 116 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 MAP7D2Q96T17 732 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 PPP1R12CQ9BZL4 782 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 BLZF1Q9H2G9 400 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 PRDM5Q9NQX1 630 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 DACT1Q9NYF0 836 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 KCND2Q9NZV8 630 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 AKT3Q9Y243 479 aa22.2■■□□□ 1.14
SHKBP1-222ENST00000600320 SFI1A8K8P3 1242 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 SLC34A2O95436 690 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 CTSHP09668 335 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 PRR29P0C7W0 189 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 CKBP12277 381 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 MGAT3Q09327 533 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 ZNF618Q5T7W0 954 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 PRPF31Q8WWY3 499 aaKnown RBP22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 PSPC1Q8WXF1 523 aaKnown RBP22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 TRIM9Q9C026 710 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 CDHR5Q9HBB8 845 aa22.19■■□□□ 1.14
SHKBP1-222ENST00000600320 KIAA0355O15063 1070 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 CHRNA1P02708 482 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 KRT18P05783 430 aaKnown RBP22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 ITGB8P26012 769 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 DNM2P50570 870 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 GPC3P51654 580 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 MRPS6P82932 125 aaKnown RBP22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 CUL4BQ13620 913 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 RHPN2Q8IUC4 686 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 NME8Q8N427 588 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 CAGE1Q8TC20 777 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 TIGD1Q96MW7 591 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 C7orf25Q9BPX7 421 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 TIPINQ9BVW5 301 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 OSBPL7Q9BZF2 842 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 WNT8AQ9H1J5 351 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 ADAMTS10Q9H324 1103 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 HIPK3Q9H422 1215 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 COL4A3BPQ9Y5P4 624 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 CDY2AQ9Y6F7 541 aa22.18■■□□□ 1.14
SHKBP1-222ENST00000600320 GPR32O75388 356 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 CYP2C18P33260 490 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 LAMTOR4Q0VGL1 99 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 BFSP2Q13515 415 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 CAPSQ13938 189 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 FAM26DQ5JW98 314 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 RSPH3Q86UC2 560 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 DPF3Q92784 378 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 KIFAP3Q92845 792 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 TRPV2Q9Y5S1 764 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 PDE4DIPQ5VU43 2346 aa22.17■■□□□ 1.14
SHKBP1-222ENST00000600320 SIP14410 1827 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 GTPBP6O43824 516 aaPredicted RBP22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 EVI5O60447 810 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 KINO60870 393 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 CAND2O75155 1236 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 NLRP11P59045 1033 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 AMPD3Q01432 767 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 KIZQ2M2Z5 673 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 CNNM4Q6P4Q7 775 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 LRRC8DQ7L1W4 858 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 CCDC155Q8N6L0 562 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 NLRP4Q96MN2 994 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 CELF4Q9BZC1 486 aaKnown RBP22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 LRRC27Q9C0I9 530 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 ODF2LQ9ULJ1 636 aa22.16■■□□□ 1.14
SHKBP1-222ENST00000600320 A0A087WZ62 844 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 PITPNM1O00562 1244 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 FAM13AO94988 1023 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 RPLP2P05387 115 aaKnown RBP22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 SELPP16109 830 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 ZNF131P52739 623 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 CCL23P55773 120 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 ASIC1P78348 528 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 MDM2Q00987 491 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 MBTPS1Q14703 1052 aa22.15■■□□□ 1.14
SHKBP1-222ENST00000600320 TMEM40Q8WWA1 233 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms