RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 CAVIN1Q6NZI2 390 aaKnown RBP14.19□□□□□ -0.14
UPF1-208ENST00000600012 MOXD1Q6UVY6 613 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 ZNF689Q96CS4 500 aaPredicted RBP14.19□□□□□ -0.14
UPF1-208ENST00000600012 MBOAT7Q96N66 472 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 UIMC1Q96RL1 719 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 JPH1Q9HDC5 661 aaPredicted RBP14.19□□□□□ -0.14
UPF1-208ENST00000600012 CLDND1Q9NY35 253 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 SQORQ9Y6N5 450 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 KIAA1671Q9BY89 1806 aa14.19□□□□□ -0.14
UPF1-208ENST00000600012 CYP3A7-CYP3A51PA0A087WV96 503 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 FAM86B1E9PN63 330 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 M0QZ92 97 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 LAD1O00515 517 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 GRM6O15303 877 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 DGKIO75912 1065 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 FAM86B2P0C5J1 330 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 INSRRP14616 1297 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 PFKFB1P16118 471 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 CYP3A7P24462 503 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 CIITAP33076 1130 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 IGBP1P78318 339 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 BTG3Q14201 252 aaPredicted RBP14.18□□□□□ -0.14
UPF1-208ENST00000600012 PRR16Q569H4 304 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 IER5Q5VY09 327 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 RESP18Q5W5W9 173 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 ARL6IP4Q66PJ3 421 aaKnown RBP14.18□□□□□ -0.14
UPF1-208ENST00000600012 CCDC73Q6ZRK6 1079 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 GJA10Q969M2 543 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 MTMR9Q96QG7 549 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 PLVAPQ9BX97 442 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 FTHL17Q9BXU8 183 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 AZI2Q9H6S1 392 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 SLC9A2Q9UBY0 812 aa14.18□□□□□ -0.14
UPF1-208ENST00000600012 IGLV3-22A0A075B6J6 115 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 NR1I2O75469 434 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 CMA1P23946 247 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 PRPHP41219 470 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 NDUFA8P51970 172 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 ZP2Q05996 745 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 CTC1Q2NKJ3 1217 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 Q4G0T1 1027 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 DTHD1Q6ZMT9 781 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 USP49Q70CQ1 688 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 ZNF579Q8NAF0 562 aaKnown RBP14.17□□□□□ -0.14
UPF1-208ENST00000600012 CYP2W1Q8TAV3 490 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 HAS1Q92839 578 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 LENG9Q96B70 501 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 PCYT2Q99447 389 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 MXRA8Q9BRK3 442 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 SDF4Q9BRK5 362 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 FAM49AQ9H0Q0 323 aaPredicted RBP14.17□□□□□ -0.14
UPF1-208ENST00000600012 GZF1Q9H116 711 aaPredicted RBP14.17□□□□□ -0.14
UPF1-208ENST00000600012 AGO3Q9H9G7 860 aaKnown RBP14.17□□□□□ -0.14
UPF1-208ENST00000600012 KCNH7Q9NS40 1196 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 TMEM63CQ9P1W3 806 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 TRPC6Q9Y210 931 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 TRPV2Q9Y5S1 764 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 WDR81Q562E7 1941 aa14.17□□□□□ -0.14
UPF1-208ENST00000600012 NFASCO94856 1347 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 PIEZO1Q92508 2521 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 DCXO43602 365 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 MARCH6O60337 910 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 CD52P31358 61 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 LTBRP36941 435 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 TXKP42681 527 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 HYAL1Q12794 435 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 PLA2G4DQ86XP0 818 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 ADHFE1Q8IWW8 467 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 CMTR2Q8IYT2 770 aaKnown RBP14.16□□□□□ -0.14
UPF1-208ENST00000600012 LINC01599Q8WXQ3 324 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 P2RX5Q93086 422 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 KCNMB3Q9NPA1 279 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 DACT1Q9NYF0 836 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 PCDHA2Q9Y5H9 948 aa14.16□□□□□ -0.14
UPF1-208ENST00000600012 IGSF9BQ9UPX0 1349 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 EVPLQ92817 2033 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 POTEB3A0JP26 581 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 PP2D1A8MPX8 630 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 MSH4O15457 936 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 LONP1P36776 959 aaKnown RBP14.15□□□□□ -0.14
UPF1-208ENST00000600012 TECP42680 631 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 SLC26A2P50443 739 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 STAT5BP51692 787 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 ACTR2P61160 394 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 FAM160A1Q05DH4 1040 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 PAK2Q13177 524 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 PLCB4Q15147 1175 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 CEP55Q53EZ4 464 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 POTEBQ6S5H4 581 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 FAM43BQ6ZT52 329 aaPredicted RBP14.15□□□□□ -0.14
UPF1-208ENST00000600012 PLPPR4Q7Z2D5 763 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 FMR1NBQ8N0W7 255 aaPredicted RBP14.15□□□□□ -0.14
UPF1-208ENST00000600012 ENGASEQ8NFI3 743 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 ETNPPLQ8TBG4 499 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 PPP2R3CQ969Q6 453 aa14.15□□□□□ -0.14
UPF1-208ENST00000600012 ZBTB10Q96DT7 871 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms