RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 STXBP5LQ9Y2K9 1186 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 PTPRSQ13332 1948 aa31.45■■■□□ 2.62
SSBP4-206ENST00000599699 DENND3A2RUS2 1198 aa31.44■■■□□ 2.62
SSBP4-206ENST00000599699 SYT1P21579 422 aa31.44■■■□□ 2.62
SSBP4-206ENST00000599699 IBSPP21815 317 aaPredicted RBP31.44■■■□□ 2.62
SSBP4-206ENST00000599699 CCT6AP40227 531 aaKnown RBP31.44■■■□□ 2.62
SSBP4-206ENST00000599699 NLRP4Q96MN2 994 aa31.44■■■□□ 2.62
SSBP4-206ENST00000599699 GCOM2Q9BZD3 368 aaPredicted RBP31.44■■■□□ 2.62
SSBP4-206ENST00000599699 TSPYL2Q9H2G4 693 aaPredicted RBP31.44■■■□□ 2.62
SSBP4-206ENST00000599699 CERS4Q9HA82 394 aa31.44■■■□□ 2.62
SSBP4-206ENST00000599699 DARSP14868 501 aaKnown RBP31.43■■■□□ 2.62
SSBP4-206ENST00000599699 RPA1P27694 616 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 PRPHP41219 470 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 TAP1Q03518 808 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 PDIA5Q14554 519 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 POTEGQ6S5H5 508 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 RTN4RL1Q86UN2 441 aaPredicted RBP31.43■■■□□ 2.62
SSBP4-206ENST00000599699 PSPC1Q8WXF1 523 aaKnown RBP31.43■■■□□ 2.62
SSBP4-206ENST00000599699 NACC1Q96RE7 527 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 MTRQ99707 1265 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 CHD9Q3L8U1 2897 aa31.43■■■□□ 2.62
SSBP4-206ENST00000599699 LOXHD1Q8IVV2 1947 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 A0A087WZ62 844 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 GAS2O43903 313 aaKnown RBP31.42■■■□□ 2.62
SSBP4-206ENST00000599699 ARHGEF15O94989 841 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 XRCC6P12956 609 aaKnown RBP eCLIP31.42■■■□□ 2.62
SSBP4-206ENST00000599699 FOSL2P15408 326 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 KSR1Q8IVT5 923 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 TCP11Q8WWU5 503 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 PRPF31Q8WWY3 499 aaKnown RBP31.42■■■□□ 2.62
SSBP4-206ENST00000599699 ADAM2Q99965 735 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 FDXACB1Q9BRP7 624 aaPredicted RBP31.42■■■□□ 2.62
SSBP4-206ENST00000599699 COL4A3BPQ9Y5P4 624 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 STK24Q9Y6E0 443 aa31.42■■■□□ 2.62
SSBP4-206ENST00000599699 RARRES1P49788 294 aa31.41■■■□□ 2.62
SSBP4-206ENST00000599699 HTRA4P83105 476 aaPredicted RBP31.41■■■□□ 2.62
SSBP4-206ENST00000599699 ATP2C1P98194 919 aaPredicted RBP31.41■■■□□ 2.62
SSBP4-206ENST00000599699 FAM43BQ6ZT52 329 aaPredicted RBP31.41■■■□□ 2.62
SSBP4-206ENST00000599699 ZNF410Q86VK4 478 aa31.41■■■□□ 2.62
SSBP4-206ENST00000599699 IGSF22Q8N9C0 903 aa31.41■■■□□ 2.62
SSBP4-206ENST00000599699 GAS2L1Q99501 681 aaPredicted RBP31.41■■■□□ 2.62
SSBP4-206ENST00000599699 ATP6V0A4Q9HBG4 840 aa31.41■■■□□ 2.62
SSBP4-206ENST00000599699 MGEA5O60502 916 aa31.4■■■□□ 2.62
SSBP4-206ENST00000599699 CSDE1O75534 798 aaKnown RBP31.4■■■□□ 2.62
SSBP4-206ENST00000599699 DGAT1O75907 488 aa31.4■■■□□ 2.62
SSBP4-206ENST00000599699 IL17AQ16552 155 aa31.4■■■□□ 2.62
SSBP4-206ENST00000599699 SNX29Q8TEQ0 813 aa31.4■■■□□ 2.62
SSBP4-206ENST00000599699 ARNTL2Q8WYA1 636 aa31.4■■■□□ 2.62
SSBP4-206ENST00000599699 LRFN2Q9ULH4 789 aa31.4■■■□□ 2.62
SSBP4-206ENST00000599699 USO1O60763 962 aaKnown RBP31.39■■■□□ 2.62
SSBP4-206ENST00000599699 SRGAP2CP0DJJ0 459 aa31.39■■■□□ 2.62
SSBP4-206ENST00000599699 FGFR4P22455 802 aa31.39■■■□□ 2.62
SSBP4-206ENST00000599699 KRT79Q5XKE5 535 aa31.39■■■□□ 2.62
SSBP4-206ENST00000599699 INO80BQ9C086 356 aaPredicted RBP31.39■■■□□ 2.62
SSBP4-206ENST00000599699 LINC01553A4QN01 128 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 STAG3L1P0CL83 205 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 ZSCAN20P17040 1043 aaPredicted RBP31.38■■■□□ 2.61
SSBP4-206ENST00000599699 LAMTOR4Q0VGL1 99 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 NPAS4Q8IUM7 802 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 XPNPEP1Q9NQW7 623 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 RGS18Q9NS28 235 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 C1orf112Q9NSG2 853 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 DBR1Q9UK59 544 aaKnown RBP31.38■■■□□ 2.61
SSBP4-206ENST00000599699 MTUS1Q9ULD2 1270 aa31.38■■■□□ 2.61
SSBP4-206ENST00000599699 VWA3AA6NCI4 1184 aa31.37■■■□□ 2.61
SSBP4-206ENST00000599699 PP2D1A8MPX8 630 aa31.37■■■□□ 2.61
SSBP4-206ENST00000599699 MUTP22033 750 aa31.37■■■□□ 2.61
SSBP4-206ENST00000599699 SFPQP23246 707 aaKnown RBP eCLIP31.37■■■□□ 2.61
SSBP4-206ENST00000599699 TGS1Q96RS0 853 aaKnown RBP31.37■■■□□ 2.61
SSBP4-206ENST00000599699 KIAA1024Q9UPX6 916 aa31.37■■■□□ 2.61
SSBP4-206ENST00000599699 ARHGEF35A5YM69 484 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 ASAP2O43150 1006 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 STX6O43752 255 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 IGFBP4P22692 258 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 SARSP49591 514 aaKnown RBP31.36■■■□□ 2.61
SSBP4-206ENST00000599699 ARL6IP4Q66PJ3 421 aaKnown RBP31.36■■■□□ 2.61
SSBP4-206ENST00000599699 SLC24A5Q71RS6 500 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 SPRED2Q7Z698 418 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 SP7Q8TDD2 431 aaPredicted RBP31.36■■■□□ 2.61
SSBP4-206ENST00000599699 RNF216Q9NWF9 866 aaPredicted RBP31.36■■■□□ 2.61
SSBP4-206ENST00000599699 MTMR6Q9Y217 621 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 PCDHB7Q9Y5E2 793 aa31.36■■■□□ 2.61
SSBP4-206ENST00000599699 BMP15O95972 392 aa31.35■■■□□ 2.61
SSBP4-206ENST00000599699 CDC25AP30304 524 aa31.35■■■□□ 2.61
SSBP4-206ENST00000599699 RESTQ13127 1097 aa31.35■■■□□ 2.61
SSBP4-206ENST00000599699 MXD4Q14582 209 aaPredicted RBP31.35■■■□□ 2.61
SSBP4-206ENST00000599699 ZRSR1Q15695 479 aaKnown RBP31.35■■■□□ 2.61
SSBP4-206ENST00000599699 ECM1Q16610 540 aa31.35■■■□□ 2.61
SSBP4-206ENST00000599699 MAEAQ7L5Y9 396 aa31.35■■■□□ 2.61
SSBP4-206ENST00000599699 RNF149Q8NC42 400 aa31.35■■■□□ 2.61
SSBP4-206ENST00000599699 DDX19AQ9NUU7 478 aaKnown RBP31.35■■■□□ 2.61
SSBP4-206ENST00000599699 CDH23Q9H251 3354 aa31.34■■■□□ 2.61
SSBP4-206ENST00000599699 DSC3Q14574 896 aa31.34■■■□□ 2.61
SSBP4-206ENST00000599699 SF3A1Q15459 793 aaKnown RBP31.34■■■□□ 2.61
SSBP4-206ENST00000599699 CATSPER4Q7RTX7 472 aa31.34■■■□□ 2.61
SSBP4-206ENST00000599699 ARID2Q68CP9 1835 aa31.33■■■□□ 2.61
SSBP4-206ENST00000599699 RFXAPO00287 272 aa31.33■■■□□ 2.61
SSBP4-206ENST00000599699 TFDP1Q14186 410 aa31.33■■■□□ 2.61
SSBP4-206ENST00000599699 PADI6Q6TGC4 694 aa31.33■■■□□ 2.61
SSBP4-206ENST00000599699 FIBCD1Q8N539 461 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms