RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
ZNF548-209ENST00000598895 PDIA4P13667 645 aaKnown RBP13.47□□□□□ -0.25
ZNF548-209ENST00000598895 SYT1P21579 422 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 POLGP54098 1239 aaPredicted RBP13.47□□□□□ -0.25
ZNF548-209ENST00000598895 RILPL1Q5EBL4 403 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 PPP2R2DQ66LE6 453 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 KSR1Q8IVT5 923 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 NEK9Q8TD19 979 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 NLRP7Q8WX94 980 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 PDLIM2Q96JY6 352 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 CCDC43Q96MW1 224 aaKnown RBP13.47□□□□□ -0.25
ZNF548-209ENST00000598895 GUCD1Q96NT3 240 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
ZNF548-209ENST00000598895 LRWD1Q9UFC0 647 aa13.47□□□□□ -0.25
ZNF548-209ENST00000598895 KDM3AQ9Y4C1 1321 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 PP2D1A8MPX8 630 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 CSDE1O75534 798 aaKnown RBP13.46□□□□□ -0.25
ZNF548-209ENST00000598895 SPATA31C1P0DKV0 1188 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 PDCP20941 246 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 FGFR4P22455 802 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 DNM2P50570 870 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 GPC3P51654 580 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 CRYBB1P53674 252 aaPredicted RBP13.46□□□□□ -0.25
ZNF548-209ENST00000598895 GRIN2CQ14957 1233 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 IL17AQ16552 155 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 FAM173BQ6P4H8 233 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 POTEGQ6S5H5 508 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 SPRED2Q7Z698 418 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 ERMNQ8TAM6 284 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 GPT2Q8TD30 523 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 LINC01599Q8WXQ3 324 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 SLC7A3Q8WY07 619 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 TMEM143Q96AN5 459 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 NLRP4Q96MN2 994 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 ST3GAL5Q9UNP4 418 aa13.46□□□□□ -0.25
ZNF548-209ENST00000598895 A0A087WZ62 844 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 ENPP3O14638 875 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 OFD1O75665 1012 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 GJB5O95377 273 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 CDC25AP30304 524 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
ZNF548-209ENST00000598895 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
ZNF548-209ENST00000598895 EMC2Q15006 297 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 FOXD4L5Q5VV16 416 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-209ENST00000598895 MAEAQ7L5Y9 396 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 RTN4RL1Q86UN2 441 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-209ENST00000598895 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 FOXD4L4Q8WXT5 416 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-209ENST00000598895 CDX2Q99626 313 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-209ENST00000598895 FDXACB1Q9BRP7 624 aaPredicted RBP13.45□□□□□ -0.26
ZNF548-209ENST00000598895 RBSNQ9H1K0 784 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 TMX1Q9H3N1 280 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 PRDM12Q9H4Q4 367 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 ERVK-5Q9HDB9 667 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 TUFT1Q9NNX1 390 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
ZNF548-209ENST00000598895 LAMA3Q16787 3333 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-209ENST00000598895 MGEA5O60502 916 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 USO1O60763 962 aaKnown RBP13.44□□□□□ -0.26
ZNF548-209ENST00000598895 LYPLA2O95372 231 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 RFC5P40937 340 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 ATP2C1P98194 919 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-209ENST00000598895 RESTQ13127 1097 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 PKP1Q13835 747 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 ZRSR1Q15695 479 aaKnown RBP13.44□□□□□ -0.26
ZNF548-209ENST00000598895 ECM1Q16610 540 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 BRAPQ7Z569 592 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 UBE2Q2Q8WVN8 375 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 TOP1MTQ969P6 601 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 MTRQ99707 1265 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 POLR3CQ9BUI4 534 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-209ENST00000598895 TSPY26PQ9H489 355 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 DHX33Q9H6R0 707 aaKnown RBP13.44□□□□□ -0.26
ZNF548-209ENST00000598895 ANKEF1Q9NU02 776 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 SQORQ9Y6N5 450 aa13.44□□□□□ -0.26
ZNF548-209ENST00000598895 TMEM265A0A087WTH1 108 aa13.43□□□□□ -0.26
ZNF548-209ENST00000598895 DENND3A2RUS2 1198 aa13.43□□□□□ -0.26
ZNF548-209ENST00000598895 RFXAPO00287 272 aa13.43□□□□□ -0.26
ZNF548-209ENST00000598895 LAD1O00515 517 aa13.43□□□□□ -0.26
ZNF548-209ENST00000598895 GPR182O15218 404 aa13.43□□□□□ -0.26
ZNF548-209ENST00000598895 SRGAP2CP0DJJ0 459 aa13.43□□□□□ -0.26
ZNF548-209ENST00000598895 DARSP14868 501 aaKnown RBP13.43□□□□□ -0.26
ZNF548-209ENST00000598895 EIF4BP23588 611 aaKnown RBP13.43□□□□□ -0.26
ZNF548-209ENST00000598895 RPA1P27694 616 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms