RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 ERMNQ8TAM6 284 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 TMEM40Q8WWA1 233 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 CEP170P1Q96L14 293 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 SCLT1Q96NL6 688 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 MAP7D2Q96T17 732 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 FTHL17Q9BXU8 183 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 TMX1Q9H3N1 280 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 ZSWIM4Q9H7M6 989 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 ADGRA3Q8IWK6 1321 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 CLCN3P51790 818 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 CRIPAKQ8N1N5 446 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 LRRC71Q8N4P6 559 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 SAMD11Q96NU1 681 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 RAB34Q9BZG1 259 aa17.25■□□□□ 0.35
XRCC1-206ENST00000597811 VTNP04004 478 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 YWHABP31946 246 aaKnown RBP17.24■□□□□ 0.35
XRCC1-206ENST00000597811 DNM2P50570 870 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 XKR9Q5GH70 373 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 DTHD1Q6ZMT9 781 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 C4orf19Q8IY42 314 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 TMEM192Q8IY95 271 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 FIBCD1Q8N539 461 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 LINC01465Q8N7H1 131 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 NEK9Q8TD19 979 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 ZNF689Q96CS4 500 aaPredicted RBP17.24■□□□□ 0.35
XRCC1-206ENST00000597811 OSMRQ99650 979 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 NIFKQ9BYG3 293 aaKnown RBP17.24■□□□□ 0.35
XRCC1-206ENST00000597811 ERVK-5Q9HDB9 667 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
XRCC1-206ENST00000597811 NOC2LQ9Y3T9 749 aaKnown RBP17.24■□□□□ 0.35
XRCC1-206ENST00000597811 H3BNC9 293 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 LAD1O00515 517 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 STX6O43752 255 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 MGEA5O60502 916 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 GPR32O75388 356 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 RPS6KA5O75582 802 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 DGKIO75912 1065 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 SLITRK3O94933 977 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 POLGP54098 1239 aaPredicted RBP17.23■□□□□ 0.35
XRCC1-206ENST00000597811 NPEPPSP55786 919 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 NFX1Q12986 1120 aaKnown RBP17.23■□□□□ 0.35
XRCC1-206ENST00000597811 ANO5Q75V66 913 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 JPH2Q9BR39 696 aaPredicted RBP17.23■□□□□ 0.35
XRCC1-206ENST00000597811 CYP26B1Q9NR63 512 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
XRCC1-206ENST00000597811 BMP2KQ9NSY1 1161 aaPredicted RBP17.23■□□□□ 0.35
XRCC1-206ENST00000597811 WRAP73Q9P2S5 460 aaPredicted RBP17.23■□□□□ 0.35
XRCC1-206ENST00000597811 ARID2Q68CP9 1835 aa17.23■□□□□ 0.35
XRCC1-206ENST00000597811 PLXNA4Q9HCM2 1894 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 CCT6AP40227 531 aaKnown RBP17.22■□□□□ 0.35
XRCC1-206ENST00000597811 KCNQ1P51787 676 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 CRYBB1P53674 252 aaPredicted RBP17.22■□□□□ 0.35
XRCC1-206ENST00000597811 GPM6BQ13491 265 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 FOXD4L5Q5VV16 416 aaPredicted RBP17.22■□□□□ 0.35
XRCC1-206ENST00000597811 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 FAM228AQ86W67 206 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 NPAS4Q8IUM7 802 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 EXOC8Q8IYI6 725 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 C4orf32Q8N8J7 132 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 FOXD4L4Q8WXT5 416 aaPredicted RBP17.22■□□□□ 0.35
XRCC1-206ENST00000597811 ZNF668Q96K58 619 aaPredicted RBP17.22■□□□□ 0.35
XRCC1-206ENST00000597811 ST3GAL5Q9UNP4 418 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 COG5Q9UP83 839 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 C5orf42Q9H799 3197 aa17.22■□□□□ 0.35
XRCC1-206ENST00000597811 ZBTB39O15060 712 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 STBD1O95210 358 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 CTNNB1P35222 781 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 NLRP11P59045 1033 aaKnown RBP17.21■□□□□ 0.35
XRCC1-206ENST00000597811 BTG3Q14201 252 aaPredicted RBP17.21■□□□□ 0.35
XRCC1-206ENST00000597811 TARBP2Q15633 366 aaKnown RBP17.21■□□□□ 0.35
XRCC1-206ENST00000597811 ZRSR1Q15695 479 aaKnown RBP17.21■□□□□ 0.35
XRCC1-206ENST00000597811 ADAMTS19Q8TE59 1207 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 CLP1Q92989 425 aaKnown RBP17.21■□□□□ 0.35
XRCC1-206ENST00000597811 HLA-CQ95604 372 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 MRPL38Q96DV4 380 aaKnown RBP17.21■□□□□ 0.35
XRCC1-206ENST00000597811 HSD17B14Q9BPX1 270 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 TUFT1Q9NNX1 390 aa17.21■□□□□ 0.35
XRCC1-206ENST00000597811 A0A087WWV3 80 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 MED24O75448 989 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 BMP1P13497 986 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 IBSPP21815 317 aaPredicted RBP17.2■□□□□ 0.34
XRCC1-206ENST00000597811 BMPR1AP36894 532 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.34
XRCC1-206ENST00000597811 CEBPZQ03701 1054 aaKnown RBP17.2■□□□□ 0.34
XRCC1-206ENST00000597811 BECN1Q14457 450 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 AAK1Q2M2I8 961 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 KRT79Q5XKE5 535 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 CATSPER3Q86XQ3 398 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 ADAM2Q99965 735 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 ADAMTS10Q9H324 1103 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms