RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 KCNT2Q6UVM3 1135 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 VN1R2Q8NFZ6 395 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 ZNF558Q96NG5 402 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 CASD1Q96PB1 797 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 TCF25Q9BQ70 676 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 APOL5Q9BWW9 433 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 SLC26A6Q9BXS9 759 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 DISC1Q9NRI5 854 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 VPS54Q9P1Q0 977 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 LZTS1Q9Y250 596 aa11.93□□□□□ -0.5
CHMP2A-202ENST00000596708 MSH4O15457 936 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 GAS7O60861 476 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 OATP04181 439 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 ATF7P17544 494 aaPredicted RBP11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 FGFR4P22455 802 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 CA8P35219 290 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 PBX3P40426 434 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 GPC3P51654 580 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 NLRP5P59047 1200 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 CCT2P78371 535 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 TBC1D8BQ0IIM8 1120 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 CBX2Q14781 532 aaPredicted RBP11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 ANKRD54Q6NXT1 300 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 LRRC55Q6ZSA7 311 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 TMC7Q7Z402 723 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 BMP8AQ7Z5Y6 402 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 ECHDC2Q86YB7 292 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 SUGP1Q8IWZ8 645 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 LRRC43Q8N309 656 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 NLRP7Q8WX94 980 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 TEKT3Q9BXF9 490 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 RNF26Q9BY78 433 aaPredicted RBP11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 ADAMTS10Q9H324 1103 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 NGRNQ9NPE2 291 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 SPG21Q9NZD8 308 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 SNX14Q9Y5W7 946 aa11.92□□□□□ -0.5
CHMP2A-202ENST00000596708 ZDBF2Q9HCK1 2354 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 HIDE1A8MVS5 230 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 ZNF862O60290 1169 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 SP100P23497 879 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 PSMA5P28066 241 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 SFNP31947 248 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 HSPA4P34932 840 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 PPM1AP35813 382 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 USP11P51784 963 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 JAK3P52333 1124 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 PRKCEQ02156 737 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 SIGLEC14Q08ET2 396 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 NTRK3Q16288 839 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 LRCH2Q5VUJ6 765 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 TMEM184AQ6ZMB5 413 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 MIER3Q7Z3K6 550 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 ZBTB33Q86T24 672 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 LINC01465Q8N7H1 131 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 HELQQ8TDG4 1101 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 SUSD6Q92537 303 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 KCNB2Q92953 911 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 LENG9Q96B70 501 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 UNC45AQ9H3U1 944 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 RNF19AQ9NV58 838 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 DACT1Q9NYF0 836 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 TDRD15B5MCY1 1934 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 PIEZO1Q92508 2521 aa11.91□□□□□ -0.5
CHMP2A-202ENST00000596708 NT5C1B-RDH14C9J2C7 533 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 CSDE1O75534 798 aaKnown RBP11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 EOMESO95936 686 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 IFNAR1P17181 557 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 RPS6KB1P23443 525 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 KCNC3Q14003 757 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 UGCGQ16739 394 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 MTERF2Q49AM1 385 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 SYCE2Q6PIF2 218 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 TBCKQ8TEA7 893 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 CASP10Q92851 521 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 GJA10Q969M2 543 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 RIT2Q99578 217 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 GCOM2Q9BZD3 368 aaPredicted RBP11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 S1PR5Q9H228 398 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 NID2Q14112 1375 aa11.9□□□□□ -0.5
CHMP2A-202ENST00000596708 C2orf16Q68DN1 1984 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 A0A0U1RQF3 1178 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 EDIL3O43854 480 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 HOXB8P17481 243 aaPredicted RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 PDIA3P30101 505 aaKnown RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 ALDH7A1P49419 539 aaKnown RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 DNM2P50570 870 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 SSRP1Q08945 709 aaKnown RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 SMC1AQ14683 1233 aaKnown RBP11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 IER5LQ5T953 404 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 TRIM22Q8IYM9 498 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 SLC39A11Q8N1S5 342 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 FBXL16Q8N461 479 aa11.89□□□□□ -0.51
CHMP2A-202ENST00000596708 FBXL6Q8N531 539 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms