RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 ARHGEF35A5YM69 484 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 GPR182O15218 404 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 USO1O60763 962 aaKnown RBP16.69■□□□□ 0.26
IRF3-211ENST00000596644 ZSCAN22P10073 491 aaPredicted RBP16.69■□□□□ 0.26
IRF3-211ENST00000596644 PBX2P40425 430 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 RABGGTBP53611 331 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 ZNF697Q5TEC3 545 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 CDK5RAP3Q96JB5 506 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 NLRP4Q96MN2 994 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 FTHL17Q9BXU8 183 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 GCOM2Q9BZD3 368 aaPredicted RBP16.69■□□□□ 0.26
IRF3-211ENST00000596644 COL4A3BPQ9Y5P4 624 aa16.69■□□□□ 0.26
IRF3-211ENST00000596644 F13A1P00488 732 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 EIF4BP23588 611 aaKnown RBP16.68■□□□□ 0.26
IRF3-211ENST00000596644 ECM1Q16610 540 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 FAM117BQ6P1L5 589 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 TMCO2Q7Z6W1 182 aaPredicted RBP16.68■□□□□ 0.26
IRF3-211ENST00000596644 ZNF410Q86VK4 478 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 FAM228AQ86W67 206 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 PRPF31Q8WWY3 499 aaKnown RBP16.68■□□□□ 0.26
IRF3-211ENST00000596644 TIFAQ96CG3 184 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 AK8Q96MA6 479 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 ZNF396Q96N95 335 aaPredicted RBP16.68■□□□□ 0.26
IRF3-211ENST00000596644 USP28Q96RU2 1077 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 ERVK-5Q9HDB9 667 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 XPNPEP1Q9NQW7 623 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 ST3GAL5Q9UNP4 418 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 PCDHA11Q9Y5I1 949 aa16.68■□□□□ 0.26
IRF3-211ENST00000596644 A0A087WZ62 844 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.67■□□□□ 0.26
IRF3-211ENST00000596644 TLL1O43897 1013 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 DARSP14868 501 aaKnown RBP16.67■□□□□ 0.26
IRF3-211ENST00000596644 MARCKSP29966 332 aaPredicted RBP16.67■□□□□ 0.26
IRF3-211ENST00000596644 LONP1P36776 959 aaKnown RBP16.67■□□□□ 0.26
IRF3-211ENST00000596644 UBA7P41226 1012 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 PTPAQ15257 358 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 PADI6Q6TGC4 694 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 CABP7Q86V35 215 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 KSR1Q8IVT5 923 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 RASSF8Q8NHQ8 419 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 FDXACB1Q9BRP7 624 aaPredicted RBP16.67■□□□□ 0.26
IRF3-211ENST00000596644 MMTAG2Q9BU76 263 aaKnown RBP16.67■□□□□ 0.26
IRF3-211ENST00000596644 NT5C3AQ9H0P0 336 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 BHMT2Q9H2M3 363 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 NKX2-4Q9H2Z4 354 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 DNM3Q9UQ16 869 aa16.67■□□□□ 0.26
IRF3-211ENST00000596644 YBX2Q9Y2T7 364 aaKnown RBP16.67■□□□□ 0.26
IRF3-211ENST00000596644 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 E9PMD0 336 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 ENPP3O14638 875 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 ASAP2O43150 1006 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 UPP2O95045 317 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 GJB5O95377 273 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 SRGAP2CP0DJJ0 459 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 MYOGP15173 224 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 SFPQP23246 707 aaKnown RBP eCLIP16.66■□□□□ 0.26
IRF3-211ENST00000596644 LAMTOR4Q0VGL1 99 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 PKP1Q13835 747 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 TFDP1Q14186 410 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 MXD4Q14582 209 aaPredicted RBP16.66■□□□□ 0.26
IRF3-211ENST00000596644 STK38Q15208 465 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 FAM43BQ6ZT52 329 aaPredicted RBP16.66■□□□□ 0.26
IRF3-211ENST00000596644 Q7L0L9 218 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 MAEAQ7L5Y9 396 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 DEFB123Q8N688 67 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 MCPH1Q8NEM0 835 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 CALML4Q96GE6 196 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 INO80BQ9C086 356 aaPredicted RBP16.66■□□□□ 0.26
IRF3-211ENST00000596644 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
IRF3-211ENST00000596644 TMX1Q9H3N1 280 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 SLC28A3Q9HAS3 691 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 LAMA3Q16787 3333 aa16.66■□□□□ 0.26
IRF3-211ENST00000596644 EYA4O95677 639 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 IBSPP21815 317 aaPredicted RBP16.65■□□□□ 0.26
IRF3-211ENST00000596644 FGFR4P22455 802 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 GRIN1Q05586 938 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 FOXD4L6Q3SYB3 417 aaPredicted RBP16.65■□□□□ 0.26
IRF3-211ENST00000596644 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 FOXD4L3Q6VB84 417 aaPredicted RBP16.65■□□□□ 0.26
IRF3-211ENST00000596644 RNF149Q8NC42 400 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 LINC01599Q8WXQ3 324 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 TOP1MTQ969P6 601 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 FAM161BQ96MY7 647 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 PLIN2Q99541 437 aa16.65■□□□□ 0.26
IRF3-211ENST00000596644 TSPYL2Q9H2G4 693 aaPredicted RBP16.65■□□□□ 0.26
IRF3-211ENST00000596644 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
IRF3-211ENST00000596644 SLC26A4O43511 780 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 CSDE1O75534 798 aaKnown RBP16.64■□□□□ 0.25
IRF3-211ENST00000596644 CA3P07451 260 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 ZSCAN20P17040 1043 aaPredicted RBP16.64■□□□□ 0.25
IRF3-211ENST00000596644 CYP11B2P19099 503 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 ARL2P36404 184 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 PHKA2P46019 1235 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 NASPP49321 788 aaPredicted RBP16.64■□□□□ 0.25
IRF3-211ENST00000596644 GRB10Q13322 594 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 HYIQ5T013 277 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 PPP2R2DQ66LE6 453 aa16.64■□□□□ 0.25
IRF3-211ENST00000596644 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms