RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 SUCLA2Q9P2R7 463 aaPredicted RBP9.29□□□□□ -0.92
VRK3-211ENST00000596445 CDY2AQ9Y6F7 541 aa9.29□□□□□ -0.92
VRK3-211ENST00000596445 FAM237AA0A1B0GTK4 181 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 GOLGA6L4A6NEF3 574 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 POLR2DO15514 142 aaKnown RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 ASAP2O43150 1006 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 GPR32O75388 356 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 SSBP05455 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
VRK3-211ENST00000596445 CTSHP09668 335 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 CSF2RAP15509 400 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 GUCY2CP25092 1073 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 ARL2P36404 184 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 CRYBB1P53674 252 aaPredicted RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 NLRP11P59045 1033 aaKnown RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 MDM2Q00987 491 aaPredicted RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 FPGSQ05932 587 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 TMEM62Q0P6H9 643 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 LAMTOR4Q0VGL1 99 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 PPIGQ13427 754 aaKnown RBP eCLIP9.28□□□□□ -0.92
VRK3-211ENST00000596445 MCM6Q14566 821 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 MXD4Q14582 209 aaPredicted RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 MBTPS1Q14703 1052 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 E2F4Q16254 413 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 KIZQ2M2Z5 673 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 SV2BQ7L1I2 683 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 ZNF410Q86VK4 478 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 GPBP1Q86WP2 473 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 RHPN2Q8IUC4 686 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 IQUBQ8NA54 791 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 KIFAP3Q92845 792 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 SCLYQ96I15 445 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 RUSC1Q9BVN2 902 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 TIPINQ9BVW5 301 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 CELF4Q9BZC1 486 aaKnown RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 POLR3FQ9H1D9 316 aaPredicted RBP9.28□□□□□ -0.92
VRK3-211ENST00000596445 ADAMTS10Q9H324 1103 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 CUEDC2Q9H467 287 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 KCNH3Q9ULD8 1083 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 COL4A3BPQ9Y5P4 624 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 TRPV2Q9Y5S1 764 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 SQORQ9Y6N5 450 aa9.28□□□□□ -0.92
VRK3-211ENST00000596445 A0A1B0GVL5 298 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 NBNO60934 754 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 CXCL10P02778 98 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 PFKMP08237 780 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 PFKFB1P16118 471 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 MAGEA10P43363 369 aaPredicted RBP9.27□□□□□ -0.93
VRK3-211ENST00000596445 GPC3P51654 580 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 NDUFA8P51970 172 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 DHX8Q14562 1220 aaKnown RBP9.27□□□□□ -0.93
VRK3-211ENST00000596445 GPNMBQ14956 572 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 ARSHQ5FYA8 562 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 FBXO47Q5MNV8 452 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 FAM102BQ5T8I3 360 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 MAEAQ7L5Y9 396 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 FSIP1Q8NA03 581 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 USP38Q8NB14 1042 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 TMEM87AQ8NBN3 555 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 NLRP7Q8WX94 980 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 MRPS27Q92552 414 aaKnown RBP9.27□□□□□ -0.93
VRK3-211ENST00000596445 DHX58Q96C10 678 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 DRC1Q96MC2 740 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 PPP1R16BQ96T49 567 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 GDF15Q99988 308 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 IL23AQ9NPF7 189 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 GPRC5CQ9NQ84 441 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 PCDH10Q9P2E7 1040 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 USP25Q9UHP3 1055 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 HPSEQ9Y251 543 aa9.27□□□□□ -0.93
VRK3-211ENST00000596445 A0A087WZ62 844 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 HIP1RO75146 1068 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 SLFN14P0C7P3 912 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 SRGAP2CP0DJJ0 459 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 GHRP10912 638 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 GLRA2P23416 452 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 EIF4BP23588 611 aaKnown RBP9.26□□□□□ -0.93
VRK3-211ENST00000596445 SYKP43405 635 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 AMPD3Q01432 767 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 POU5F1BQ06416 359 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 RAD51AP2Q09MP3 1159 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 MAPK7Q13164 816 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 TFDP1Q14186 410 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 LPIN1Q14693 890 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 TPRNQ4KMQ1 711 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 PLEKHG4Q58EX7 1191 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 TSHZ1Q6ZSZ6 1077 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 DEFB128Q7Z7B8 93 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 KSR1Q8IVT5 923 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 DAW1Q8N136 415 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 RNF149Q8NC42 400 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 ASAP3Q8TDY4 903 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 VWCEQ96DN2 955 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 IFT74Q96LB3 600 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 NLRP4Q96MN2 994 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 SCLT1Q96NL6 688 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 OSMRQ99650 979 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 FDXACB1Q9BRP7 624 aaPredicted RBP9.26□□□□□ -0.93
VRK3-211ENST00000596445 GCOM2Q9BZD3 368 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms