RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 PRKAG3Q9UGI9 489 aa20.14■□□□□ 0.81
HOMER3-208ENST00000595756 SEPT9Q9UHD8 586 aaPredicted RBP20.14■□□□□ 0.81
HOMER3-208ENST00000595756 DDX25Q9UHL0 483 aaKnown RBP20.14■□□□□ 0.81
HOMER3-208ENST00000595756 HOXA2O43364 376 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 TBX10O75333 385 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 CSPG5O95196 566 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 XBP1P17861 261 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 CSPP1Q1MSJ5 1256 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 INF2Q27J81 1249 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 XKR3Q5GH77 459 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 FAM102BQ5T8I3 360 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 KHSRPQ92945 711 aaKnown RBP eCLIP20.13■□□□□ 0.81
HOMER3-208ENST00000595756 NIFKQ9BYG3 293 aaKnown RBP20.13■□□□□ 0.81
HOMER3-208ENST00000595756 SH2B1Q9NRF2 756 aaPredicted RBP20.13■□□□□ 0.81
HOMER3-208ENST00000595756 PCDHB12Q9Y5F1 795 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 ARID2Q68CP9 1835 aa20.13■□□□□ 0.81
HOMER3-208ENST00000595756 SLC37A4O43826 429 aa20.12■□□□□ 0.81
HOMER3-208ENST00000595756 DARSP14868 501 aaKnown RBP20.12■□□□□ 0.81
HOMER3-208ENST00000595756 GCFC2P16383 781 aaKnown RBP20.12■□□□□ 0.81
HOMER3-208ENST00000595756 CEP89Q96ST8 783 aa20.12■□□□□ 0.81
HOMER3-208ENST00000595756 KCNJ14Q9UNX9 436 aa20.12■□□□□ 0.81
HOMER3-208ENST00000595756 IGKV6-21A0A0C4DH24 114 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 CCDC194A0A1B0GVG4 234 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 STBD1O95210 358 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 FGFR1P11362 822 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 ZSCAN20P17040 1043 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-208ENST00000595756 LAG3P18627 525 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 SSTR3P32745 418 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-208ENST00000595756 IRS1P35568 1242 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 CDC42EP1Q00587 391 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 ZP2Q05996 745 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 DLX2Q07687 328 aaPredicted RBP20.11■□□□□ 0.81
HOMER3-208ENST00000595756 SMAD4Q13485 552 aaKnown RBP20.11■□□□□ 0.81
HOMER3-208ENST00000595756 SMAD2Q15796 467 aaKnown RBP20.11■□□□□ 0.81
HOMER3-208ENST00000595756 ME3Q16798 604 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 LETM2Q2VYF4 491 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 MTERF2Q49AM1 385 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 TMEM31Q5JXX7 168 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 SPOUT1Q5T280 376 aaKnown RBP20.11■□□□□ 0.81
HOMER3-208ENST00000595756 PPP4R3AQ6IN85 833 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 NEK8Q86SG6 692 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 COLGALT1Q8NBJ5 622 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 GTF3C6Q969F1 213 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 SCLT1Q96NL6 688 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 TMEM117Q9H0C3 514 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 KCNMB3Q9NPA1 279 aa20.11■□□□□ 0.81
HOMER3-208ENST00000595756 GTF2F1P35269 517 aaKnown RBP eCLIP20.1■□□□□ 0.81
HOMER3-208ENST00000595756 PPP2R5CQ13362 524 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 ADAM15Q13444 863 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 ADGRD2Q7Z7M1 963 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 ADHFE1Q8IWW8 467 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 LRRC43Q8N309 656 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 EFHBQ8N7U6 833 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 NLRP7Q8WX94 980 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 FAM20AQ96MK3 541 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 NAP1L4Q99733 375 aaKnown RBP20.1■□□□□ 0.81
HOMER3-208ENST00000595756 LRFN3Q9BTN0 628 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 IGFLR1Q9H665 355 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 CWH43Q9H720 699 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 TLR9Q9NR96 1032 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 RNF19AQ9NV58 838 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 TYW1Q9NV66 732 aaKnown RBP20.1■□□□□ 0.81
HOMER3-208ENST00000595756 HCSTQ9UBK5 93 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 VAV3Q9UKW4 847 aa20.1■□□□□ 0.81
HOMER3-208ENST00000595756 FSD2A1L4K1 749 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 LINC01565O15544 149 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 MBTPS2O43462 519 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 GPR37L1O60883 481 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 FGF18O76093 207 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 NDUFV1P49821 464 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 PSMC5P62195 406 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 DRP2Q13474 957 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 ECHDC2Q86YB7 292 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 CASD1Q96PB1 797 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 C11orf16Q9NQ32 467 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 CD207Q9UJ71 328 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 LZTS1Q9Y250 596 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 TRIOO75962 3097 aa20.09■□□□□ 0.81
HOMER3-208ENST00000595756 TMEM150BA6NC51 233 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 C19orf67A6NJJ6 358 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 TBX3O15119 743 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 DKC1O60832 514 aaKnown RBP eCLIP20.08■□□□□ 0.81
HOMER3-208ENST00000595756 MAFO75444 373 aaPredicted RBP20.08■□□□□ 0.81
HOMER3-208ENST00000595756 DNM2P50570 870 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 CLUL1Q15846 466 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 ZNF410Q86VK4 478 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 THNSL1Q8IYQ7 743 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 ABI1Q8IZP0 508 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 WASF1Q92558 559 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 ZNF668Q96K58 619 aaPredicted RBP20.08■□□□□ 0.81
HOMER3-208ENST00000595756 MSLNLQ96KJ4 702 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 POP1Q99575 1024 aaKnown RBP20.08■□□□□ 0.81
HOMER3-208ENST00000595756 JPH2Q9BR39 696 aaPredicted RBP20.08■□□□□ 0.81
HOMER3-208ENST00000595756 GCOM2Q9BZD3 368 aaPredicted RBP20.08■□□□□ 0.81
HOMER3-208ENST00000595756 DACT1Q9NYF0 836 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 RAPGEFL1Q9UHV5 662 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 PPME1Q9Y570 386 aa20.08■□□□□ 0.81
HOMER3-208ENST00000595756 A0A0U1RQF3 1178 aa20.07■□□□□ 0.8
HOMER3-208ENST00000595756 CTDNEP1O95476 244 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms