RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 BCL7CQ8WUZ0 217 aaPredicted RBP13.9□□□□□ -0.18
SIN3B-204ENST00000594372 LPPQ93052 612 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 SH2D3AQ9BRG2 576 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 ESYT1Q9BSJ8 1104 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 ADAMTS10Q9H324 1103 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 ANO2Q9NQ90 1003 aa13.9□□□□□ -0.18
SIN3B-204ENST00000594372 FAM217BQ9NTX9 383 aaPredicted RBP13.9□□□□□ -0.18
SIN3B-204ENST00000594372 TDRD15B5MCY1 1934 aaKnown RBP13.9□□□□□ -0.18
SIN3B-204ENST00000594372 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 GOLGA8BA8MQT2 603 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 ZBTB43O43298 467 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 CHMP2AO43633 222 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 SLC26A2P50443 739 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 DRP2Q13474 957 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 NECTIN1Q15223 517 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 ADCK5Q3MIX3 580 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 EFCAB12Q6NXP0 572 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 SGMS1Q86VZ5 419 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 LRRC43Q8N309 656 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
SIN3B-204ENST00000594372 ZNF577Q9BSK1 485 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 BARHL2Q9NY43 387 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 SPG21Q9NZD8 308 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
SIN3B-204ENST00000594372 PUF60Q9UHX1 559 aaKnown RBP13.89□□□□□ -0.19
SIN3B-204ENST00000594372 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 MEIS3P2A8K0S8 358 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
SIN3B-204ENST00000594372 ZNF862O60290 1169 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 FOSP01100 380 aaPredicted RBP13.88□□□□□ -0.19
SIN3B-204ENST00000594372 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 MYBP10242 640 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 PKN1Q16512 942 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 PRR16Q569H4 304 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 PPP1R18Q6NYC8 613 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 SYNE3Q6ZMZ3 975 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 FRMD5Q7Z6J6 570 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 LINC01465Q8N7H1 131 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 PRRX2Q99811 253 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 MTA3Q9BTC8 594 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
SIN3B-204ENST00000594372 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
SIN3B-204ENST00000594372 MTCL1Q9Y4B5 1905 aaKnown RBP13.88□□□□□ -0.19
SIN3B-204ENST00000594372 ARID2Q68CP9 1835 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 ZNF292O60281 2723 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 B4GALT3O60512 393 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 CXCL14O95715 111 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 GPC3P51654 580 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 BCAR1P56945 870 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 AP3B2Q13367 1082 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 SMC1AQ14683 1233 aaKnown RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 PDE12Q6L8Q7 609 aaKnown RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 TMC5Q6UXY8 1006 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 MRPL43Q8N983 215 aaKnown RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 CRYGNQ8WXF5 182 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 BBXQ8WY36 941 aaPredicted RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 CASP10Q92851 521 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 ELAC1Q9H777 363 aaKnown RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
SIN3B-204ENST00000594372 TCEAL9Q9UHQ7 104 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 SORCS3Q9UPU3 1222 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 INPP5FQ9Y2H2 1132 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 SAMM50Q9Y512 469 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 CACNA1IQ9P0X4 2223 aa13.87□□□□□ -0.19
SIN3B-204ENST00000594372 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 EDIL3O43854 480 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 ZC3H11AO75152 810 aaKnown RBP eCLIP13.86□□□□□ -0.19
SIN3B-204ENST00000594372 SSBP05455 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
SIN3B-204ENST00000594372 PSAPP07602 524 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 ZSCAN20P17040 1043 aaPredicted RBP13.86□□□□□ -0.19
SIN3B-204ENST00000594372 EXOSC10Q01780 885 aaKnown RBP13.86□□□□□ -0.19
SIN3B-204ENST00000594372 PRKCEQ02156 737 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 KRT17Q04695 432 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 ODR4Q5SWX8 454 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 NIPA1Q7RTP0 329 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 ZNF598Q86UK7 904 aaKnown RBP13.86□□□□□ -0.19
SIN3B-204ENST00000594372 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 FLCNQ8NFG4 579 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 NLRP7Q8WX94 980 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 MAP7D2Q96T17 732 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 VN1R3Q9BXE9 311 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 ADAM7Q9H2U9 754 aa13.86□□□□□ -0.19
SIN3B-204ENST00000594372 DMXL1Q9Y485 3027 aa13.85□□□□□ -0.19
SIN3B-204ENST00000594372 CEP250Q9BV73 2442 aa13.85□□□□□ -0.19
SIN3B-204ENST00000594372 COL4A3Q01955 1670 aa13.85□□□□□ -0.19
SIN3B-204ENST00000594372 SPTBN2O15020 2390 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms