RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZNF865P0CJ78 1059 aaPredicted RBP14.56□□□□□ -0.08
VRK3-205ENST00000593919 MAP2K2P36507 400 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 SOX10P56693 466 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 CEP135Q66GS9 1140 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 PLPPR4Q7Z2D5 763 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 ZNF720Q7Z2F6 126 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 IRF2BP1Q8IU81 584 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 AFG1LQ8WV93 481 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 CFHR5Q9BXR6 569 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 THAP9Q9H5L6 903 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 ATP6V0A4Q9HBG4 840 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 XPNPEP1Q9NQW7 623 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 PDLIM7Q9NR12 457 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 GABRQQ9UN88 632 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 NKRFO15226 690 aaKnown RBP eCLIP14.56□□□□□ -0.08
VRK3-205ENST00000593919 PLS3P13797 630 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 GTF2F1P35269 517 aaKnown RBP eCLIP14.56□□□□□ -0.08
VRK3-205ENST00000593919 HOXD13P35453 343 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 SP3Q02447 781 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 TNFAIP2Q03169 654 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 KCNA1Q09470 495 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 PTPN14Q15678 1187 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 BMT2Q1RMZ1 405 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 ZC2HC1CQ53FD0 456 aaPredicted RBP14.56□□□□□ -0.08
VRK3-205ENST00000593919 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
VRK3-205ENST00000593919 MCPH1Q8NEM0 835 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 FAM167AQ96KS9 214 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 CEP89Q96ST8 783 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 SMARCAD1Q9H4L7 1026 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 NRBP2Q9NSY0 501 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 RNF186Q9NXI6 227 aa14.56□□□□□ -0.08
VRK3-205ENST00000593919 KCNJ18B7U540 433 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 EIF3DO15371 548 aaKnown RBP eCLIP14.55□□□□□ -0.08
VRK3-205ENST00000593919 LGALS2P05162 132 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 XRCC5P13010 732 aaKnown RBP14.55□□□□□ -0.08
VRK3-205ENST00000593919 FLT3LGP49771 235 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 POLGP54098 1239 aaPredicted RBP14.55□□□□□ -0.08
VRK3-205ENST00000593919 KCNJ12Q14500 433 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 EMC2Q15006 297 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 TARBP2Q15633 366 aaKnown RBP14.55□□□□□ -0.08
VRK3-205ENST00000593919 KNOP1Q1ED39 458 aaKnown RBP14.55□□□□□ -0.08
VRK3-205ENST00000593919 TCP11X2Q5H9J9 407 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 FOXR2Q6PJQ5 311 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 OR6J1Q8NGC5 347 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 ZNF507Q8TCN5 953 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 TSG101Q99816 390 aa14.55□□□□□ -0.08
VRK3-205ENST00000593919 DHX33Q9H6R0 707 aaKnown RBP14.55□□□□□ -0.08
VRK3-205ENST00000593919 K7ENM7 598 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 PPP1R37O75864 691 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
VRK3-205ENST00000593919 SLC26A2P50443 739 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 PEX3P56589 373 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 PRKCZQ05513 592 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 PLCB4Q15147 1175 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 KRT31Q15323 416 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 E4F1Q66K89 784 aaPredicted RBP14.54□□□□□ -0.08
VRK3-205ENST00000593919 LRRC55Q6ZSA7 311 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 ATP8B4Q8TF62 1192 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 NOC3LQ8WTT2 800 aaKnown RBP14.54□□□□□ -0.08
VRK3-205ENST00000593919 KIFAP3Q92845 792 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 LENG1Q96BZ8 264 aaPredicted RBP14.54□□□□□ -0.08
VRK3-205ENST00000593919 GNEQ9Y223 722 aaKnown RBP14.54□□□□□ -0.08
VRK3-205ENST00000593919 ZMYM2Q9UBW7 1377 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 ZNF286BP0CG31 522 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 MAPTP10636 758 aaKnown RBP14.54□□□□□ -0.08
VRK3-205ENST00000593919 SPAG1Q07617 926 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 KIF22Q14807 665 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 NYAP1Q6ZVC0 841 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 STXBP4Q6ZWJ1 553 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 CREBRFQ8IUR6 639 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 KSR1Q8IVT5 923 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 SLC7A3Q8WY07 619 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 BSNDQ8WZ55 320 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 TRIB2Q92519 343 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 STRA6Q9BX79 667 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 KCND1Q9NSA2 647 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 ERAP1Q9NZ08 941 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 UBE4BO95155 1302 aa14.54□□□□□ -0.08
VRK3-205ENST00000593919 A0A1B0GTH6 734 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 ZBTB42B2RXF5 422 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 MMP3P08254 477 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 DMP1Q13316 513 aaPredicted RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 PPP1R13BQ96KQ4 1090 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 CNOT6LQ96LI5 555 aaKnown RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 CTAGE1Q96RT6 745 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 POLR3FQ9H1D9 316 aaPredicted RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 C17orf75Q9HAS0 396 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 LIMA1Q9UHB6 759 aaKnown RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 TRPC6Q9Y210 931 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 PCDHB13Q9Y5F0 798 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 LRRC10BA6NIK2 292 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 PDXKO00764 312 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 SLC16A4O15374 487 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 PPFIA4O75335 1185 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 HOXD8P13378 290 aaPredicted RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 EEF1GP26641 437 aaKnown RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 RFC5P40937 340 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 NPTX2P47972 431 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 NCKAP1LP55160 1127 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms