RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 LONP1P36776 959 aaKnown RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 FOXD4L6Q3SYB3 417 aaPredicted RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 CNKSR3Q6P9H4 555 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 FOXD4L3Q6VB84 417 aaPredicted RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 TFIP11Q9UBB9 837 aaKnown RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 SQORQ9Y6N5 450 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 GHRP10912 638 aa21.81■■□□□ 1.08
LSM4-203ENST00000593829 MKRN4PQ13434 485 aaPredicted RBP21.81■■□□□ 1.08
LSM4-203ENST00000593829 PLEKHG4Q58EX7 1191 aa21.81■■□□□ 1.08
LSM4-203ENST00000593829 HABP4Q5JVS0 413 aaKnown RBP21.81■■□□□ 1.08
LSM4-203ENST00000593829 FBXO47Q5MNV8 452 aa21.81■■□□□ 1.08
LSM4-203ENST00000593829 OSBPL7Q9BZF2 842 aa21.81■■□□□ 1.08
LSM4-203ENST00000593829 DDX19AQ9NUU7 478 aaKnown RBP21.81■■□□□ 1.08
LSM4-203ENST00000593829 GINS2Q9Y248 185 aa21.81■■□□□ 1.08
LSM4-203ENST00000593829 SRPRBQ9Y5M8 271 aaKnown RBP21.81■■□□□ 1.08
LSM4-203ENST00000593829 EVPLQ92817 2033 aa21.81■■□□□ 1.08
LSM4-203ENST00000593829 GAS2O43903 313 aaKnown RBP21.8■■□□□ 1.08
LSM4-203ENST00000593829 DGAT1O75907 488 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 CDC42EP1Q00587 391 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 DRP2Q13474 957 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 EMC2Q15006 297 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 STK38Q15208 465 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 KIZQ2M2Z5 673 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 RASIP1Q5U651 963 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 ATL3Q6DD88 541 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 USP38Q8NB14 1042 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 DBF4BQ8NFT6 615 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 SEPT8Q92599 483 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 CHAMP1Q96JM3 812 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 SUCLA2Q9P2R7 463 aaPredicted RBP21.8■■□□□ 1.08
LSM4-203ENST00000593829 FBXO2Q9UK22 296 aaPredicted RBP21.8■■□□□ 1.08
LSM4-203ENST00000593829 GPR32O75388 356 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 UBA7P41226 1012 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 NLRP11P59045 1033 aaKnown RBP21.8■■□□□ 1.08
LSM4-203ENST00000593829 GRIN1Q05586 938 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 LPIN1Q14693 890 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 ZRSR1Q15695 479 aaKnown RBP21.8■■□□□ 1.08
LSM4-203ENST00000593829 LINC00301Q8NCQ3 95 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 PPP1R16BQ96T49 567 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 MTRQ99707 1265 aa21.8■■□□□ 1.08
LSM4-203ENST00000593829 BMP2KQ9NSY1 1161 aaPredicted RBP21.8■■□□□ 1.08
LSM4-203ENST00000593829 SLC26A4O43511 780 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 BAIAP3O94812 1187 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 CRYBB1P53674 252 aaPredicted RBP21.79■■□□□ 1.08
LSM4-203ENST00000593829 TSHZ1Q6ZSZ6 1077 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 CABP7Q86V35 215 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 IFIH1Q9BYX4 1025 aaKnown RBP21.79■■□□□ 1.08
LSM4-203ENST00000593829 NT5C3AQ9H0P0 336 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 CDHR5Q9HBB8 845 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 ATP6V0A4Q9HBG4 840 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 CXXC1Q9P0U4 656 aaPredicted RBP21.79■■□□□ 1.08
LSM4-203ENST00000593829 DNM3Q9UQ16 869 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 MYH15Q9Y2K3 1946 aa21.79■■□□□ 1.08
LSM4-203ENST00000593829 ARHGEF35A5YM69 484 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 ZBBXA8MT70 800 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 YEATS4O95619 227 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 IKBKEQ14164 716 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 LRIT3Q3SXY7 679 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 HYIQ5T013 277 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 KRI1Q8N9T8 703 aaKnown RBP21.78■■□□□ 1.08
LSM4-203ENST00000593829 TCP11Q8WWU5 503 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 APBB2Q92870 758 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 CDK5RAP3Q96JB5 506 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 CSRNP2Q9H175 543 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 CFAP45Q9UL16 551 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 ARID2Q68CP9 1835 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 ABHD14A-ACY1A0A1B0GW23 586 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 SPTLC2O15270 562 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 GPC3P51654 580 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 RHPN2Q8IUC4 686 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 KCTD17Q8N5Z5 321 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 TET1Q8NFU7 2136 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 TMEM143Q96AN5 459 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 OSMRQ99650 979 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 ADAMTS10Q9H324 1103 aa21.78■■□□□ 1.08
LSM4-203ENST00000593829 USO1O60763 962 aaKnown RBP21.77■■□□□ 1.08
LSM4-203ENST00000593829 EFCAB14O75071 495 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 TCTN1Q2MV58 587 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 CCDC183Q5T5S1 534 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 PSPC1Q8WXF1 523 aaKnown RBP21.77■■□□□ 1.08
LSM4-203ENST00000593829 CALML4Q96GE6 196 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 SCLT1Q96NL6 688 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 PNMA5Q96PV4 448 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 BHMT2Q9H2M3 363 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 AGO3Q9H9G7 860 aaKnown RBP21.77■■□□□ 1.08
LSM4-203ENST00000593829 XPNPEP1Q9NQW7 623 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 ATP6V1DQ9Y5K8 247 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 SLC4A7Q9Y6M7 1214 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 SIP14410 1827 aa21.77■■□□□ 1.08
LSM4-203ENST00000593829 E9PMD0 336 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 RBAK-RBAKDNI3L0D1 243 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 EYA4O95677 639 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 CD52P31358 61 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 DNM1Q05193 864 aaKnown RBP21.76■■□□□ 1.07
LSM4-203ENST00000593829 GRB10Q13322 594 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 PADI6Q6TGC4 694 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 PRPF31Q8WWY3 499 aaKnown RBP21.76■■□□□ 1.07
LSM4-203ENST00000593829 NLRP7Q8WX94 980 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 CLIC6Q96NY7 704 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 COL4A3BPQ9Y5P4 624 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms