RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PPP2R5AQ15172 486 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 LONRF2Q1L5Z9 754 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.52■■□□□ 1.04
CLIP3-206ENST00000593074 SULF1Q8IWU6 871 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 CAPZA3Q96KX2 299 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 TIPINQ9BVW5 301 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 TEX13BQ9BXU2 312 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 FRMD4BQ9Y2L6 1034 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 ATP9AO75110 1047 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 ANXA13P27216 316 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 CCND2P30279 289 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 SFNP31947 248 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 PLA2G4AP47712 749 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 KRT76Q01546 638 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 UGCGQ16739 394 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 ZNF572Q7Z3I7 529 aaPredicted RBP21.52■■□□□ 1.04
CLIP3-206ENST00000593074 VSIG10LQ86VR7 867 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 FUT8Q9BYC5 575 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 ADAMTS1Q9UHI8 967 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 SNCAIPQ9Y6H5 919 aa21.52■■□□□ 1.04
CLIP3-206ENST00000593074 MYPNQ86TC9 1320 aa21.52■■□□□ 1.03
CLIP3-206ENST00000593074 TESPA1A2RU30 521 aaPredicted RBP21.51■■□□□ 1.03
CLIP3-206ENST00000593074 WDR64B1ANS9 1081 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 ZNF185O15231 689 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 CCNE2O96020 404 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 NR3C2P08235 984 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 PLS3P13797 630 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 FMO5P49326 533 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 CYP2J2P51589 502 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 PTK2Q05397 1052 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 VGLL4Q14135 290 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 NAB2Q15742 525 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 WDR93Q6P2C0 686 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 ANKRD13CQ8N6S4 541 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 AJAP1Q9UKB5 411 aaPredicted RBP21.51■■□□□ 1.03
CLIP3-206ENST00000593074 PDE2AO00408 941 aaPredicted RBP21.51■■□□□ 1.03
CLIP3-206ENST00000593074 PSMC5P62195 406 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 DLK2Q6UY11 383 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 ZNF571Q7Z3V5 609 aaPredicted RBP21.51■■□□□ 1.03
CLIP3-206ENST00000593074 CREG2Q8IUH2 290 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 RDM1Q8NG50 284 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 NSUN6Q8TEA1 469 aaKnown RBP21.51■■□□□ 1.03
CLIP3-206ENST00000593074 GPRASP2Q96D09 838 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 TMEM206Q9H813 350 aa21.51■■□□□ 1.03
CLIP3-206ENST00000593074 LOC285556D6RIA3 1793 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 SPDYE16A6NNV3 312 aaPredicted RBP21.5■■□□□ 1.03
CLIP3-206ENST00000593074 ERLIN1O75477 346 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 TCP1P17987 556 aaKnown RBP21.5■■□□□ 1.03
CLIP3-206ENST00000593074 VSNL1P62760 191 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 PLS1Q14651 629 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 BEND6Q5SZJ8 279 aaPredicted RBP21.5■■□□□ 1.03
CLIP3-206ENST00000593074 C10orf76Q5T2E6 689 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 NLRX1Q86UT6 975 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.5■■□□□ 1.03
CLIP3-206ENST00000593074 MAF1Q9H063 256 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 ST6GALNAC4Q9H4F1 302 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 ACAD9Q9H845 621 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 TCEAL9Q9UHQ7 104 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 HYOU1Q9Y4L1 999 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 CSADQ9Y600 493 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 ATP8B3O60423 1300 aa21.5■■□□□ 1.03
CLIP3-206ENST00000593074 BTNL10A8MVZ5 291 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 MAFGO15525 162 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 ITIH3Q06033 890 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 IQCEQ6IPM2 695 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 C12orf56Q8IXR9 622 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 SYCP3Q8IZU3 236 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 CAGE1Q8TC20 777 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 DRC1Q96MC2 740 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 OSBPL9Q96SU4 736 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 SENP7Q9BQF6 1050 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 SBF1O95248 1867 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 MYH10P35580 1976 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 ADM5C9JUS6 153 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 BACH1O14867 736 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 GABPB1Q06547 395 aaPredicted RBP21.49■■□□□ 1.03
CLIP3-206ENST00000593074 BFSP1Q12934 665 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 MAEAQ7L5Y9 396 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 INPP4AQ96PE3 977 aaPredicted RBP21.49■■□□□ 1.03
CLIP3-206ENST00000593074 SYT17Q9BSW7 474 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 UBXN6Q9BZV1 441 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 ANKEF1Q9NU02 776 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 CYP39A1Q9NYL5 469 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 TSKSQ9UJT2 592 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 NENFQ9UMX5 172 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 PCDHGC5Q9Y5F6 944 aa21.49■■□□□ 1.03
CLIP3-206ENST00000593074 KLRC1P26715 233 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 ENOX2Q16206 610 aaKnown RBP21.48■■□□□ 1.03
CLIP3-206ENST00000593074 KIAA0753Q2KHM9 967 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 ZNF746Q6NUN9 644 aaPredicted RBP21.48■■□□□ 1.03
CLIP3-206ENST00000593074 CCDC43Q96MW1 224 aaKnown RBP21.48■■□□□ 1.03
CLIP3-206ENST00000593074 ACCSQ96QU6 501 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 TLR10Q9BXR5 811 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 DAAM1Q9Y4D1 1078 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 TARSL2A2RTX5 802 aaKnown RBP21.48■■□□□ 1.03
CLIP3-206ENST00000593074 MAP2K7O14733 419 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 BUB1O43683 1085 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 EXOC3O60645 756 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 GTF2BQ00403 316 aa21.48■■□□□ 1.03
CLIP3-206ENST00000593074 CBWD6Q4V339 395 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms