RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 CPXCR1Q8N123 301 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 DAW1Q8N136 415 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 STK33Q9BYT3 514 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 GINM1Q9NU53 330 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 MAP3K20Q9NYL2 800 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 LARSQ9P2J5 1176 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 INTUQ9ULD6 942 aa18.07■□□□□ 0.48
PRKCSH-217ENST00000592741 DHX15O43143 795 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 H2AFZP0C0S5 128 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 MAPTP10636 758 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 LMAN1P49257 510 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 EPHB4P54760 987 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 MYL7Q01449 175 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 H2AFVQ71UI9 128 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 SAMD3Q8N6K7 520 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 INTS2Q9H0H0 1204 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 SLC38A10Q9HBR0 1119 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 RAVER2Q9HCJ3 691 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 PACSIN2Q9UNF0 486 aaPredicted RBP18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 SAMM50Q9Y512 469 aa18.06■□□□□ 0.48
PRKCSH-217ENST00000592741 F8VZ95 297 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 ITGB3BPQ13352 177 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 MTMR1Q13613 665 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 SYTL5Q8TDW5 730 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 INPP4AQ96PE3 977 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 DNAJC12Q9UKB3 198 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 CTDP1Q9Y5B0 961 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 ZHX2Q9Y6X8 837 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 ZC3H4Q9UPT8 1303 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 A0A0A6YYK5 440 aaPredicted RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 DDX3XO00571 662 aaKnown RBP eCLIP18.05■□□□□ 0.483e-22■■■■□ 24.1
PRKCSH-217ENST00000592741 EVI5O60447 810 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 PHACTR2O75167 634 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 SYF2O95926 243 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 CCDC172P0C7W6 258 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 TRIM49P0CI25 452 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 TRIM49CP0CI26 452 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 KRT13P13646 458 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 QARSP47897 775 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 BFSP1Q12934 665 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 PLS1Q14651 629 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 CBWD6Q4V339 395 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 CBWD3Q5JTY5 395 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 CBWD5Q5RIA9 395 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 SND1Q7KZF4 910 aaKnown RBP eCLIP18.05■□□□□ 0.486e-11■■■■■ 29.5
PRKCSH-217ENST00000592741 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 LMBR1Q8WVP7 490 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 JDP2Q8WYK2 163 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 HINFPQ9BQA5 517 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 HOMER2Q9NSB8 354 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 TBC1D22BQ9NU19 505 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 PNMA2Q9UL42 364 aa18.05■□□□□ 0.48
PRKCSH-217ENST00000592741 RNF40O75150 1001 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 KIF4AO95239 1232 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 LYPLA2O95372 231 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 LMNB1P20700 586 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 MRPS25P82663 173 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 MRPS9P82933 396 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 DRAP1Q14919 205 aaPredicted RBP18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 MUM1L1Q5H9M0 696 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 TAF3Q5VWG9 929 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 EMBQ6PCB8 327 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 MAEAQ7L5Y9 396 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 IFT20Q8IY31 132 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 GOLGA6L1Q8N7Z2 621 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 LRRC57Q8N9N7 239 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 PBKQ96KB5 322 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 ACCSQ96QU6 501 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 SCAF8Q9UPN6 1271 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 RARRES1P49788 294 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 TPCN2Q8NHX9 752 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 PKNOX2Q96KN3 472 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 TEPSINQ96N21 525 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 PIM2Q9P1W9 311 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 APEX2Q9UBZ4 518 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 PPP1R9AQ9ULJ8 1098 aa18.04■□□□□ 0.48
PRKCSH-217ENST00000592741 GOLGA6BA6NDN3 693 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 KCNK3O14649 394 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 CTNND1O60716 968 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 PLS3P13797 630 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 RFX1P22670 979 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 TNNC1P63316 161 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 SYCE1Q8N0S2 351 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 SLC16A10Q8TF71 515 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 TIPINQ9BVW5 301 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 FER1L6Q2WGJ9 1857 aa18.03■□□□□ 0.48
PRKCSH-217ENST00000592741 ZBED4O75132 1171 aa18.02■□□□□ 0.48
PRKCSH-217ENST00000592741 GGCXP38435 758 aa18.02■□□□□ 0.48
PRKCSH-217ENST00000592741 ZNF280AP59817 542 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-217ENST00000592741 PGM5Q15124 567 aa18.02■□□□□ 0.48
PRKCSH-217ENST00000592741 INTS8Q75QN2 995 aaKnown RBP18.02■□□□□ 0.48
PRKCSH-217ENST00000592741 USP38Q8NB14 1042 aa18.02■□□□□ 0.48
PRKCSH-217ENST00000592741 LNX1Q8TBB1 728 aaPredicted RBP18.02■□□□□ 0.48
PRKCSH-217ENST00000592741 CAVIN3Q969G5 261 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms