RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 AP1M1Q9BXS5 423 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 ODF2LQ9ULJ1 636 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 SLITRK3O94933 977 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 FSBPO95073 299 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 BMP3P12645 472 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 ALDH1B1P30837 517 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 CYP4A11Q02928 519 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 GJB7Q6PEY0 223 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 MICALCLQ6ZW33 695 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 DAAM2Q86T65 1068 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 MYCBPAPQ8TBZ2 947 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 ZNF473Q8WTR7 871 aaKnown RBP12.62□□□□□ -0.39
ZNF540-210ENST00000592533 U2AF1L4Q8WU68 220 aaKnown RBP12.62□□□□□ -0.39
ZNF540-210ENST00000592533 STRA6Q9BX79 667 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 DDX47Q9H0S4 455 aaKnown RBP12.62□□□□□ -0.39
ZNF540-210ENST00000592533 CARD9Q9H257 536 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 PARVGQ9HBI0 331 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 AMFRQ9UKV5 643 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 CLIC2O15247 247 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
ZNF540-210ENST00000592533 FAM13AO94988 1023 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 CCDC172P0C7W6 258 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 POLD1P28340 1107 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 PTENP60484 403 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 KIF22Q14807 665 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 ABCB5Q2M3G0 1257 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 STRIP1Q5VSL9 837 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 CYP2W1Q8TAV3 490 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 KCNQ5Q9NR82 932 aa12.62□□□□□ -0.39
ZNF540-210ENST00000592533 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 MYO1FO00160 1098 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 ITGA4P13612 1032 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 INPP5BP32019 993 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 USH1GQ495M9 461 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 STXBP4Q6ZWJ1 553 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 ZNF720Q7Z2F6 126 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 NLRP14Q86W24 1093 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 BCAS3Q9H6U6 928 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 RGL1Q9NZL6 768 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 TMCO5BA8MYB1 307 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 BUB1BO60566 1050 aaPredicted RBP12.61□□□□□ -0.39
ZNF540-210ENST00000592533 PPFIA2O75334 1257 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 TRIM37O94972 964 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 CTNNA1P35221 906 aaKnown RBP12.61□□□□□ -0.39
ZNF540-210ENST00000592533 PLS1Q14651 629 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 DACT2Q5SW24 774 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 SLC35G2Q8TBE7 412 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 CCT8L2Q96SF2 557 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 NAP1L3Q99457 506 aaPredicted RBP12.61□□□□□ -0.39
ZNF540-210ENST00000592533 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
ZNF540-210ENST00000592533 ZNFX1Q9P2E3 1918 aaKnown RBP12.61□□□□□ -0.39
ZNF540-210ENST00000592533 NMT1P30419 496 aaKnown RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 FNTAP49354 379 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DRAP1Q14919 205 aaPredicted RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DCAF12L1Q5VU92 463 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 ICE2Q659A1 982 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 B3GNT9Q6UX72 402 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 MMS22LQ6ZRQ5 1243 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DDX42Q86XP3 938 aaKnown RBP eCLIP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DNAAF5Q86Y56 855 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 CNPY4Q8N129 248 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 ATP8B4Q8TF62 1192 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 VTI1AQ96AJ9 217 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 AMACRQ9UHK6 382 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DNAJC12Q9UKB3 198 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 PRR12Q9ULL5 1215 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 BRWD3Q6RI45 1802 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 PRELPP51888 382 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 MCCD1P59942 119 aaPredicted RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 SNAP25P60880 206 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 C6orf89Q6UWU4 347 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 MYCT1Q8N699 235 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 KAT2BQ92831 832 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 INTS2Q9H0H0 1204 aaKnown RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 RAB17Q9H0T7 212 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 UTP11Q9Y3A2 253 aaKnown RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 TTI1O43156 1089 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DAPK3O43293 454 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 RAD21O60216 631 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 ENTPD3O75355 529 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 LIG3P49916 1009 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DRG2P55039 364 aaKnown RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 EIF3BP55884 814 aaKnown RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 TCP10Q12799 353 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DRP2Q13474 957 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 CBWD6Q4V339 395 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 CBWD3Q5JTY5 395 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 CBWD5Q5RIA9 395 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 GLYCTKQ8IVS8 523 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 PRPF38AQ8NAV1 312 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms