RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 NOC4LQ9BVI4 516 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-217ENST00000591595 RNPEPL1Q9HAU8 725 aa13.2□□□□□ -0.3
SMARCA4-217ENST00000591595 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
SMARCA4-217ENST00000591595 CTNNAL1Q9UBT7 734 aa13.2□□□□□ -0.3
SMARCA4-217ENST00000591595 UBOX5O94941 541 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 HERVK_113P62684 666 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 MUM1Q2TAK8 710 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 ANKK1Q8NFD2 765 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 TMEM60Q9H2L4 133 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 NHEJ1Q9H9Q4 299 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 PDP2Q9P2J9 529 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 CAPN11Q9UMQ6 739 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 PCDHA4Q9UN74 947 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 TESPA1A2RU30 521 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 TNFRSF8P28908 595 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 PPP2R2AP63151 447 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 HPCAP84074 193 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 POTEEQ6S8J3 1075 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 ABCF3Q9NUQ8 709 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 PRELID1Q9Y255 219 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 DDX60Q8IY21 1712 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 BCL9O00512 1426 aa13.19□□□□□ -0.3
SMARCA4-217ENST00000591595 FAM153BP0C7A2 387 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 ETS2P15036 469 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 PRDX5P30044 214 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 ZNF131P52739 623 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 GEMIN4P57678 1058 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 MAP7Q14244 749 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 LETM2Q2VYF4 491 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 FAM153CQ494X1 144 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 TMCO5AQ8N6Q1 288 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 STKLD1Q8NE28 680 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 ATP6V0A1Q93050 837 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 DHTKD1Q96HY7 919 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 FAM84BQ96KN1 310 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 MIS12Q9H081 205 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 FAM153AQ9UHL3 310 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 PLAAQ9Y263 795 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 ZNF652Q9Y2D9 606 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 ECM29Q5VYK3 1845 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 BOLA2-SMG1P6H3BVE0 249 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 RAD21O60216 631 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 NTSR2O95665 410 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 USP17L8P0C7I0 530 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 KLC3Q6P597 504 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 WDR59Q6PJI9 974 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 ATP8B4Q8TF62 1192 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 DNAJC7Q99615 494 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 LRCH1Q9Y2L9 728 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 HEY1Q9Y5J3 304 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 RGL2O15211 777 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 CAMTA2O94983 1202 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 RCN2Q14257 317 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 INAQ16352 499 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 KRT26Q7Z3Y9 468 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 LSM14AQ8ND56 463 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 NFU1Q9UMS0 254 aa13.18□□□□□ -0.3
SMARCA4-217ENST00000591595 PMS2P54278 862 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 DHX9Q08211 1270 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 ERFEQ4G0M1 354 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 NAALADL2Q58DX5 795 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 TYW1BQ6NUM6 668 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 CABP7Q86V35 215 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 MREGQ8N565 214 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 SLC17A8Q8NDX2 589 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 NSUN4Q96CB9 384 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 EIF2AQ9BY44 585 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 FAM207AQ9NSI2 230 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 SAMD15Q9P1V8 674 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 PDS5AQ29RF7 1337 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 GOLGA8HP0CJ92 632 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 KLRK1P26718 216 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 ADARP55265 1226 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 HAUS3Q68CZ6 603 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 INTS5Q6P9B9 1019 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 MAML3Q96JK9 1138 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 RAB17Q9H0T7 212 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms