RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 TCP11Q8WWU5 503 aa20.36■□□□□ 0.85
CROCCP3-205ENST00000591316 PRPF31Q8WWY3 499 aaKnown RBP20.36■□□□□ 0.85
CROCCP3-205ENST00000591316 PAGE5Q96GU1 130 aa20.36■□□□□ 0.85
CROCCP3-205ENST00000591316 MAP7D2Q96T17 732 aa20.36■□□□□ 0.85
CROCCP3-205ENST00000591316 ZHX3Q9H4I2 956 aa20.36■□□□□ 0.85
CROCCP3-205ENST00000591316 HIP1RO75146 1068 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 AMPD3Q01432 767 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 LINC01465Q8N7H1 131 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 DDX12PQ92771 950 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 POLR3FQ9H1D9 316 aaPredicted RBP20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 BLZF1Q9H2G9 400 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 HIPK3Q9H422 1215 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 KBTBD4Q9NVX7 518 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 DACT1Q9NYF0 836 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 USP25Q9UHP3 1055 aa20.35■□□□□ 0.85
CROCCP3-205ENST00000591316 TRIM43BA6NCK2 446 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 RSPH10B2B2RC85 870 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 RSPH10BP0C881 870 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 SRGAP2CP0DJJ0 459 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 CKBP12277 381 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 NLRP11P59045 1033 aaKnown RBP20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 BFSP2Q13515 415 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 GIT2Q14161 759 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 ZNF618Q5T7W0 954 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 NME8Q8N427 588 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 PSPC1Q8WXF1 523 aaKnown RBP20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 TRIM43Q96BQ3 446 aaPredicted RBP20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 REEP2Q9BRK0 252 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 TNMDQ9H2S6 317 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 PRKAG2Q9UGJ0 569 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 UMODL1Q5DID0 1318 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 GAS2O43903 313 aaKnown RBP20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 GUCY2CP25092 1073 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 CYP2C18P33260 490 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 ARL2P36404 184 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 CCL23P55773 120 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 KIZQ2M2Z5 673 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 TRIM71Q2Q1W2 868 aaKnown RBP20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 NLRP4Q96MN2 994 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 SCLT1Q96NL6 688 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 LRRC27Q9C0I9 530 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 CDHR5Q9HBB8 845 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 KCND2Q9NZV8 630 aa20.34■□□□□ 0.85
CROCCP3-205ENST00000591316 KINO60870 393 aaKnown RBP20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 IDEP14735 1019 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 SYN1P17600 705 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 LAMTOR4Q0VGL1 99 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 CUL4BQ13620 913 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 CCDC155Q8N6L0 562 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 CAGE1Q8TC20 777 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 ASAP3Q8TDY4 903 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 NOC4LQ9BVI4 516 aaKnown RBP20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 MAGEF1Q9HAY2 307 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 TBX21Q9UL17 535 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 COL4A3BPQ9Y5P4 624 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 CDY2AQ9Y6F7 541 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 EVPLQ92817 2033 aa20.33■□□□□ 0.84
CROCCP3-205ENST00000591316 M0QZ92 97 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 CHRNA1P02708 482 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 RAG1P15918 1043 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 GLRA2P23416 452 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 ITGB8P26012 769 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 MRPS6P82932 125 aaKnown RBP20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 DAW1Q8N136 415 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 NLRP7Q8WX94 980 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 KIFAP3Q92845 792 aa20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 ZMYND8Q9ULU4 1186 aaPredicted RBP20.32■□□□□ 0.84
CROCCP3-205ENST00000591316 FAM13AO94988 1023 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 PEX3P56589 373 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 MAPK7Q13164 816 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 MXD4Q14582 209 aaPredicted RBP20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 KANK3Q6NY19 840 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 RPAINQ86UA6 219 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 MYCT1Q8N699 235 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 RNF149Q8NC42 400 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 GPT2Q8TD30 523 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 BSNDQ8WZ55 320 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 DNAJC19Q96DA6 116 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 SCLYQ96I15 445 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 IFT74Q96LB3 600 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 DRC1Q96MC2 740 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 C7orf25Q9BPX7 421 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 TIPINQ9BVW5 301 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 CELF4Q9BZC1 486 aaKnown RBP20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 TRIM9Q9C026 710 aa20.31■□□□□ 0.84
CROCCP3-205ENST00000591316 A0A087WZ62 844 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 CCDC169A6NNP5 214 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 KIAA0355O15063 1070 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 ASAP2O43150 1006 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 TBCAO75347 108 aaKnown RBP20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 GPR32O75388 356 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 CSDE1O75534 798 aaKnown RBP20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 PRR29P0C7W0 189 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 SELPP16109 830 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 GPC3P51654 580 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 ASIC1P78348 528 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 CAMK4Q16566 473 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 TIGD1Q96MW7 591 aa20.3■□□□□ 0.84
CROCCP3-205ENST00000591316 OSMRQ99650 979 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms