RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 DNAJC19Q96DA6 116 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 PAGE5Q96GU1 130 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 HTATIP2Q9BUP3 242 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 TRIM9Q9C026 710 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 SUGCTQ9HAC7 445 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 TBX21Q9UL17 535 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 NOD1Q9Y239 953 aa13.38□□□□□ -0.27
APOC1-206ENST00000590334 SCN5AQ14524 2016 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 ASAP2O43150 1006 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 HIP1RO75146 1068 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 CLTBP09497 229 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 PTMSP20962 102 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 ZNF131P52739 623 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 CDC42EP1Q00587 391 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 POU5F1BQ06416 359 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 MXD4Q14582 209 aaPredicted RBP13.37□□□□□ -0.27
APOC1-206ENST00000590334 FAM26DQ5JW98 314 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 CCDC155Q8N6L0 562 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 GPT2Q8TD30 523 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 PRPF31Q8WWY3 499 aaKnown RBP13.37□□□□□ -0.27
APOC1-206ENST00000590334 PSPC1Q8WXF1 523 aaKnown RBP13.37□□□□□ -0.27
APOC1-206ENST00000590334 STAMQ92783 540 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 DRC1Q96MC2 740 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 REEP2Q9BRK0 252 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
APOC1-206ENST00000590334 DACT1Q9NYF0 836 aa13.37□□□□□ -0.27
APOC1-206ENST00000590334 SUCLA2Q9P2R7 463 aaPredicted RBP13.37□□□□□ -0.27
APOC1-206ENST00000590334 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 FRMD3A2A2Y4 597 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 KIAA0355O15063 1070 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 KINO60870 393 aaKnown RBP13.36□□□□□ -0.27
APOC1-206ENST00000590334 MBD3O95983 291 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 CKBP12277 381 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 AFMP43652 599 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 RGS19P49795 217 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 MGAT3Q09327 533 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 LAMTOR4Q0VGL1 99 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 BFSP2Q13515 415 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 FAM102BQ5T8I3 360 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 TRAF7Q6Q0C0 670 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 CCDC34Q96HJ3 373 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 NOC4LQ9BVI4 516 aaKnown RBP13.36□□□□□ -0.27
APOC1-206ENST00000590334 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
APOC1-206ENST00000590334 POLR3FQ9H1D9 316 aaPredicted RBP13.36□□□□□ -0.27
APOC1-206ENST00000590334 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 AKT3Q9Y243 479 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
APOC1-206ENST00000590334 RSPH10B2B2RC85 870 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
APOC1-206ENST00000590334 GPR32O75388 356 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 VTNP04004 478 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 KRT18P05783 430 aaKnown RBP13.35□□□□□ -0.27
APOC1-206ENST00000590334 RSPH10BP0C881 870 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 GLRA2P23416 452 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 THPOP40225 353 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 GPC3P51654 580 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 MRPS6P82932 125 aaKnown RBP13.35□□□□□ -0.27
APOC1-206ENST00000590334 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 DPYDQ12882 1025 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 CUL4BQ13620 913 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 MAEAQ7L5Y9 396 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 DYMQ7RTS9 669 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 ZNF410Q86VK4 478 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 ASAP3Q8TDY4 903 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 NTPCRQ9BSD7 190 aaKnown RBP13.35□□□□□ -0.27
APOC1-206ENST00000590334 NFKBIZQ9BYH8 718 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 ADAMTS10Q9H324 1103 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 KCNG1Q9UIX4 513 aa13.35□□□□□ -0.27
APOC1-206ENST00000590334 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
APOC1-206ENST00000590334 PVALEFA0A1B0GWK0 134 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 TRIM43BA6NCK2 446 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 KLRC4O43908 158 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 CHRNA1P02708 482 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 PLS3P13797 630 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 CASP1P29466 404 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 NAMPTP43490 491 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 CRYBB1P53674 252 aaPredicted RBP13.34□□□□□ -0.27
APOC1-206ENST00000590334 NLRP11P59045 1033 aaKnown RBP13.34□□□□□ -0.27
APOC1-206ENST00000590334 EHHADHQ08426 723 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 CAPSQ13938 189 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 POSTNQ15063 836 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 PPP2R5AQ15172 486 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 ZNF618Q5T7W0 954 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
APOC1-206ENST00000590334 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 KSR1Q8IVT5 923 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 SPATA20Q8TB22 786 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 SPIRE2Q8WWL2 714 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 BSNDQ8WZ55 320 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 KCNN1Q92952 543 aa13.34□□□□□ -0.27
APOC1-206ENST00000590334 TRIM43Q96BQ3 446 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms