RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 TNNT3P45378 269 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-208ENST00000589706 MECP2P51608 486 aaKnown RBP6.79□□□□□ -1.32
SMAD4-208ENST00000589706 OCRLQ01968 901 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 PIN1Q13526 163 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-208ENST00000589706 NKPD1Q17RQ9 610 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 INF2Q27J81 1249 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 FAM47CQ5HY64 1035 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 OVCH1Q7RTY7 1134 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 CHPFQ8IZ52 775 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 FBXW5Q969U6 566 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 HOOK2Q96ED9 719 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 PDLIM2Q96JY6 352 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 PTCHD1Q96NR3 888 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 GBP4Q96PP9 640 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 FOXP3Q9BZS1 431 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 IPPKQ9H8X2 491 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 DDX21Q9NR30 783 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMAD4-208ENST00000589706 ATG3Q9NT62 314 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 AP5S1Q9NUS5 200 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 THG1LQ9NWX6 298 aaKnown RBP6.79□□□□□ -1.32
SMAD4-208ENST00000589706 STOML1Q9UBI4 398 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 RCAN3Q9UKA8 241 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 MON2Q7Z3U7 1717 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 TNKSO95271 1327 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 MAP3K19Q56UN5 1328 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 KIF16BQ96L93 1317 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 FAM47E-STBD1D6RA91 191 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 H0YIN7 160 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 FBXO21O94952 628 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 EPHX2P34913 555 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 DNM2P50570 870 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 GTF2A1P52655 376 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-208ENST00000589706 OXCT1P55809 520 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 ST5P78524 1137 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 DUSP27Q5VZP5 1158 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 MBLAC2Q68D91 279 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-208ENST00000589706 C16orf59Q7L2K0 433 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 RPAINQ86UA6 219 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 PNMA8AQ86V59 439 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-208ENST00000589706 CPNE8Q86YQ8 564 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 C2CD5Q86YS7 1000 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 MYO1HQ8N1T3 1032 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 FBXL6Q8N531 539 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 NGEFQ8N5V2 710 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 MFSD14AQ96MC6 490 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 MENTQ9BUN1 341 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 EMC7Q9NPA0 242 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 SPTLC3Q9NUV7 552 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 ZSWIM5Q9P217 1185 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 HACL1Q9UJ83 578 aa6.78□□□□□ -1.32
SMAD4-208ENST00000589706 ROCK2O75116 1388 aaKnown RBP6.78□□□□□ -1.32
SMAD4-208ENST00000589706 USP42Q9H9J4 1324 aaKnown RBP6.77□□□□□ -1.32
SMAD4-208ENST00000589706 ADAMTSL1Q8N6G6 1762 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 MAFGO15525 162 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 MYO1BO43795 1136 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 ULK1O75385 1050 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 TBC1D8O95759 1140 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 ATP2A2P16615 1042 aaKnown RBP6.77□□□□□ -1.33
SMAD4-208ENST00000589706 ENDOUP21128 410 aaKnown RBP6.77□□□□□ -1.33
SMAD4-208ENST00000589706 KPNA1P52294 538 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-208ENST00000589706 FAPQ12884 760 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 ZKSCAN8Q15776 578 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-208ENST00000589706 ATP2B3Q16720 1220 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 GAB4Q2WGN9 574 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 CST9Q5W186 159 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 ICE2Q659A1 982 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 TMED8Q6PL24 325 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-208ENST00000589706 RNF111Q6ZNA4 994 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 C11orf74Q86VG3 221 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 SLC17A8Q8NDX2 589 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 HSPA12BQ96MM6 686 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 CDADC1Q9BWV3 514 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 CDH19Q9H159 772 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 MKNK2Q9HBH9 465 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 DONSONQ9NYP3 566 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 PPARGC1AQ9UBK2 798 aaKnown RBP6.77□□□□□ -1.33
SMAD4-208ENST00000589706 FEZ2Q9UHY8 353 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-208ENST00000589706 U3KQE9 123 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 DLEC1Q9Y238 1755 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 FER1L6Q2WGJ9 1857 aa6.77□□□□□ -1.33
SMAD4-208ENST00000589706 MAPK8IP3Q9UPT6 1336 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 PTPDC1A2A3K4 754 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 H3BS24 57 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 K7ESF4 209 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 FKTNO75072 461 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 PEX14O75381 377 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 F13BP05160 661 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 CAPN2P17655 700 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 GRK2P25098 689 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 GRK3P35626 688 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 KIAA2012Q0VF49 1180 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 TRDNQ13061 729 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 LSAMPQ13449 338 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 LAPTM5Q13571 262 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 ARHGAP44Q17R89 818 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 CIAPIN1Q6FI81 312 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 CASC1Q6TDU7 716 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 THAP5Q7Z6K1 395 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms