RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 DNTTIP2Q5QJE6 756 aaKnown RBP19.56■□□□□ 0.72
DNMT1-215ENST00000588913 FAM200AQ8TCP9 573 aa19.56■□□□□ 0.72
DNMT1-215ENST00000588913 SUGCTQ9HAC7 445 aa19.56■□□□□ 0.72
DNMT1-215ENST00000588913 VWA3AA6NCI4 1184 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 CAND2O75155 1236 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 GPR32O75388 356 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 MAFO75444 373 aaPredicted RBP19.55■□□□□ 0.72
DNMT1-215ENST00000588913 GTF2F1P35269 517 aaKnown RBP eCLIP19.55■□□□□ 0.72
DNMT1-215ENST00000588913 CEBPZQ03701 1054 aaKnown RBP19.55■□□□□ 0.72
DNMT1-215ENST00000588913 RPUSD2Q8IZ73 545 aaKnown RBP19.55■□□□□ 0.72
DNMT1-215ENST00000588913 LRRC15Q8TF66 581 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 NUP62CLQ9H1M0 184 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 XPNPEP1Q9NQW7 623 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 LRWD1Q9UFC0 647 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 CEP131Q9UPN4 1083 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 TBC1D8BQ0IIM8 1120 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 KIZQ2M2Z5 673 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 LRIT3Q3SXY7 679 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 KCNK18Q7Z418 384 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 KSR1Q8IVT5 923 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 CEP170P1Q96L14 293 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 POLR3CQ9BUI4 534 aaPredicted RBP19.55■□□□□ 0.72
DNMT1-215ENST00000588913 ZSCAN16Q9H4T2 348 aaPredicted RBP19.55■□□□□ 0.72
DNMT1-215ENST00000588913 DHX33Q9H6R0 707 aaKnown RBP19.55■□□□□ 0.72
DNMT1-215ENST00000588913 TRPV2Q9Y5S1 764 aa19.55■□□□□ 0.72
DNMT1-215ENST00000588913 RPA1P27694 616 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 DEFB103AP81534 67 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 TMEM266Q2M3C6 531 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 XKR9Q5GH70 373 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 DTHD1Q6ZMT9 781 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.54■□□□□ 0.72
DNMT1-215ENST00000588913 NEK9Q8TD19 979 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 PNMA5Q96PV4 448 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 CELF4Q9BZC1 486 aaKnown RBP19.54■□□□□ 0.72
DNMT1-215ENST00000588913 ADAMTS10Q9H324 1103 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 GINS2Q9Y248 185 aa19.54■□□□□ 0.72
DNMT1-215ENST00000588913 CHD7Q9P2D1 2997 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 LAD1O00515 517 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 CD52P31358 61 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 PBX2P40425 430 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 RARRES1P49788 294 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 ATL3Q6DD88 541 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 CNKSR3Q6P9H4 555 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 LINC01599Q8WXQ3 324 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 TMEM143Q96AN5 459 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 OSMRQ99650 979 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 TUFT1Q9NNX1 390 aa19.53■□□□□ 0.72
DNMT1-215ENST00000588913 NOC2LQ9Y3T9 749 aaKnown RBP19.53■□□□□ 0.72
DNMT1-215ENST00000588913 ZBBXA8MT70 800 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 MAGEB2O15479 319 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 PFKMP08237 780 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 MARCKSP29966 332 aaPredicted RBP19.52■□□□□ 0.72
DNMT1-215ENST00000588913 CCT6AP40227 531 aaKnown RBP19.52■□□□□ 0.72
DNMT1-215ENST00000588913 PDIA5Q14554 519 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 USP49Q70CQ1 688 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.52■□□□□ 0.72
DNMT1-215ENST00000588913 SNX29Q8TEQ0 813 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 TFIP11Q9UBB9 837 aaKnown RBP19.52■□□□□ 0.72
DNMT1-215ENST00000588913 CFAP45Q9UL16 551 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 AKT3Q9Y243 479 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 KDM3AQ9Y4C1 1321 aa19.52■□□□□ 0.72
DNMT1-215ENST00000588913 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.52■□□□□ 0.71
DNMT1-215ENST00000588913 CSDE1O75534 798 aaKnown RBP19.52■□□□□ 0.71
DNMT1-215ENST00000588913 GPC3P51654 580 aa19.52■□□□□ 0.71
DNMT1-215ENST00000588913 NLRP11P59045 1033 aaKnown RBP19.52■□□□□ 0.71
DNMT1-215ENST00000588913 WDR5P61964 334 aaKnown RBP19.52■□□□□ 0.71
DNMT1-215ENST00000588913 RSPH3Q86UC2 560 aa19.52■□□□□ 0.71
DNMT1-215ENST00000588913 CLIC6Q96NY7 704 aa19.52■□□□□ 0.71
DNMT1-215ENST00000588913 PLIN2Q99541 437 aa19.52■□□□□ 0.71
DNMT1-215ENST00000588913 TMX1Q9H3N1 280 aa19.52■□□□□ 0.71
DNMT1-215ENST00000588913 POLD4Q9HCU8 107 aa19.52■□□□□ 0.71
DNMT1-215ENST00000588913 FBXO2Q9UK22 296 aaPredicted RBP19.52■□□□□ 0.71
DNMT1-215ENST00000588913 MYOGP15173 224 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 RABGGTBP53611 331 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 EMC2Q15006 297 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 SPECC1Q5M775 1068 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 IER5Q5VY09 327 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 RBM43Q6ZSC3 357 aaKnown RBP19.51■□□□□ 0.71
DNMT1-215ENST00000588913 RTN4RL1Q86UN2 441 aaPredicted RBP19.51■□□□□ 0.71
DNMT1-215ENST00000588913 NME8Q8N427 588 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 IFIH1Q9BYX4 1025 aaKnown RBP19.51■□□□□ 0.71
DNMT1-215ENST00000588913 ANKEF1Q9NU02 776 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 FAM13BQ9NYF5 915 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 KIAA1024Q9UPX6 916 aa19.51■□□□□ 0.71
DNMT1-215ENST00000588913 E9PMD0 336 aa19.5■□□□□ 0.71
DNMT1-215ENST00000588913 DKC1O60832 514 aaKnown RBP eCLIP19.5■□□□□ 0.71
DNMT1-215ENST00000588913 FGFR4P22455 802 aa19.5■□□□□ 0.71
DNMT1-215ENST00000588913 GRB10Q13322 594 aa19.5■□□□□ 0.71
DNMT1-215ENST00000588913 ARL6IP4Q66PJ3 421 aaKnown RBP19.5■□□□□ 0.71
DNMT1-215ENST00000588913 FAM228AQ86W67 206 aa19.5■□□□□ 0.71
DNMT1-215ENST00000588913 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
DNMT1-215ENST00000588913 GPRC5CQ9NQ84 441 aa19.5■□□□□ 0.71
DNMT1-215ENST00000588913 SUCLA2Q9P2R7 463 aaPredicted RBP19.5■□□□□ 0.71
DNMT1-215ENST00000588913 PADI3Q9ULW8 664 aa19.5■□□□□ 0.71
DNMT1-215ENST00000588913 MGEA5O60502 916 aa19.49■□□□□ 0.71
DNMT1-215ENST00000588913 ARHGEF15O94989 841 aa19.49■□□□□ 0.71
DNMT1-215ENST00000588913 PARNO95453 639 aaKnown RBP19.49■□□□□ 0.71
DNMT1-215ENST00000588913 POLGP54098 1239 aaPredicted RBP19.49■□□□□ 0.71
DNMT1-215ENST00000588913 TSHZ1Q6ZSZ6 1077 aa19.49■□□□□ 0.71
DNMT1-215ENST00000588913 TNMDQ9H2S6 317 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms