RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 RUNDC3BQ96NL0 473 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 MXRA8Q9BRK3 442 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 RUSC1Q9BVN2 902 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 ZCCHC17Q9NP64 241 aaKnown RBP7.8□□□□□ -1.16
SPIDR-228ENST00000588781 GDF3Q9NR23 364 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 TBC1D22BQ9NU19 505 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 DMAC2Q9NW81 257 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 NAGPAQ9UK23 515 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 AMFRQ9UKV5 643 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 TFR2Q9UP52 801 aa7.8□□□□□ -1.16
SPIDR-228ENST00000588781 NCANO14594 1321 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 MIF4GDA9UHW6 222 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 TCP10L2B9ZVM9 353 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 H0YCG3 227 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 IPO5O00410 1097 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 EML1O00423 815 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 KCNK3O14649 394 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 PMM2O15305 246 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 EXOC3O60645 756 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 PPFIA4O75335 1185 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 ICAM1P05362 532 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 SLC9A1P19634 815 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 SFNP31947 248 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 CAP2P40123 477 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 HSD17B4P51659 736 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 CASP5P51878 434 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 JAK3P52333 1124 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 HNRNPH2P55795 449 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 GHRHRQ02643 423 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 FSTL1Q12841 308 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 CTTNQ14247 550 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 RASA3Q14644 834 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 SPDYCQ5MJ68 293 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 CCDC174Q6PII3 467 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 LRIG3Q6UXM1 1119 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 ZNF571Q7Z3V5 609 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 CROCCP2Q86T23 111 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 LDHDQ86WU2 507 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 SPATS2Q86XZ4 545 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 CD302Q8IX05 232 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 NIM1KQ8IY84 436 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 LARGE2Q8N3Y3 721 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 ANKRD13CQ8N6S4 541 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 PRPF38AQ8NAV1 312 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 TPCN2Q8NHX9 752 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 RFFLQ8WZ73 363 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 GJA10Q969M2 543 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 PRMT6Q96LA8 375 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 INPP4AQ96PE3 977 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 FGFBP2Q9BYJ0 223 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 INTS2Q9H0H0 1204 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 RAB17Q9H0T7 212 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 ST6GALNAC4Q9H4F1 302 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 FAM114A2Q9NRY5 505 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 AGPAT3Q9NRZ7 376 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 RBM12Q9NTZ6 932 aaKnown RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 ANKEF1Q9NU02 776 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 RASAL2Q9UJF2 1139 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 CCPG1Q9ULG6 757 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 TTC7AQ9ULT0 858 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-228ENST00000588781 PSME4Q14997 1843 aa7.79□□□□□ -1.16
SPIDR-228ENST00000588781 SLX4Q8IY92 1834 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 A0A1W2PRG0 241 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ANKRD62A6NC57 917 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SRRM3A6NNA2 597 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 TMCO5BA8MYB1 307 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 RSPH10B2B2RC85 870 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 HMGB1P1B2RPK0 211 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 K7ENM7 598 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 OPLAHO14841 1288 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 CLIC2O15247 247 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 TGFB1I1O43294 461 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 CHMP2AO43633 222 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 NCK2O43639 380 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 CEP104O60308 925 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ZBED4O75132 1171 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 GGPS1O95749 300 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SYF2O95926 243 aaKnown RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 FTCDO95954 541 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 TFRCP02786 760 aaKnown RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 RSPH10BP0C881 870 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 GGCXP38435 758 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 QARSP47897 775 aaKnown RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SMTNP53814 917 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 HADHBP55084 474 aaKnown RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SNAP25P60880 206 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 KRT76Q01546 638 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 GUCY2DQ02846 1103 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 BFSP1Q12934 665 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 TCEAL1Q15170 157 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ENOX2Q16206 610 aaKnown RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 PCNX4Q63HM2 1172 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 MSL1Q68DK7 614 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 RUFY4Q6ZNE9 571 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SLFN11Q7Z7L1 901 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 DAAM2Q86T65 1068 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 EFCAB13Q8IY85 973 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SPICE1Q8N0Z3 855 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms