RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 RESTQ13127 1097 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 EMC2Q15006 297 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 KRT79Q5XKE5 535 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 FAM117BQ6P1L5 589 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 TOP1MTQ969P6 601 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 ZNF668Q96K58 619 aaPredicted RBP20.96■□□□□ 0.95
ERCC1-207ENST00000588738 RAD9AQ99638 391 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 MTRQ99707 1265 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 GCOM2Q9BZD3 368 aaPredicted RBP20.96■□□□□ 0.95
ERCC1-207ENST00000588738 ZSCAN16Q9H4T2 348 aaPredicted RBP20.96■□□□□ 0.95
ERCC1-207ENST00000588738 ERVK-5Q9HDB9 667 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 DBR1Q9UK59 544 aaKnown RBP20.96■□□□□ 0.95
ERCC1-207ENST00000588738 ST3GAL5Q9UNP4 418 aa20.96■□□□□ 0.95
ERCC1-207ENST00000588738 A0A087WWV3 80 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 UPP2O95045 317 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 POTEGQ6S5H5 508 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 ZNF410Q86VK4 478 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 FAM228AQ86W67 206 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 SNX29Q8TEQ0 813 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 PSPC1Q8WXF1 523 aaKnown RBP20.95■□□□□ 0.94
ERCC1-207ENST00000588738 TMEM143Q96AN5 459 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 BMP2KQ9NSY1 1161 aaPredicted RBP20.95■□□□□ 0.94
ERCC1-207ENST00000588738 INSL6Q9Y581 213 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 COL4A3BPQ9Y5P4 624 aa20.95■□□□□ 0.94
ERCC1-207ENST00000588738 CHD9Q3L8U1 2897 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 A0A087WZ62 844 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 VWA3AA6NCI4 1184 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 ASAP2O43150 1006 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 SLC34A2O95436 690 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 CA3P07451 260 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 DARSP14868 501 aaKnown RBP20.94■□□□□ 0.94
ERCC1-207ENST00000588738 SF3A1Q15459 793 aaKnown RBP20.94■□□□□ 0.94
ERCC1-207ENST00000588738 PPP2R2DQ66LE6 453 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 RTN4RL1Q86UN2 441 aaPredicted RBP20.94■□□□□ 0.94
ERCC1-207ENST00000588738 PRPF31Q8WWY3 499 aaKnown RBP20.94■□□□□ 0.94
ERCC1-207ENST00000588738 FDXACB1Q9BRP7 624 aaPredicted RBP20.94■□□□□ 0.94
ERCC1-207ENST00000588738 INO80BQ9C086 356 aaPredicted RBP20.94■□□□□ 0.94
ERCC1-207ENST00000588738 TSPYL2Q9H2G4 693 aaPredicted RBP20.94■□□□□ 0.94
ERCC1-207ENST00000588738 TMX1Q9H3N1 280 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 ATP6V0A4Q9HBG4 840 aa20.94■□□□□ 0.94
ERCC1-207ENST00000588738 DENND3A2RUS2 1198 aa20.93■□□□□ 0.94
ERCC1-207ENST00000588738 PP2D1A8MPX8 630 aa20.93■□□□□ 0.94
ERCC1-207ENST00000588738 MXD4Q14582 209 aaPredicted RBP20.93■□□□□ 0.94
ERCC1-207ENST00000588738 KSR1Q8IVT5 923 aa20.93■□□□□ 0.94
ERCC1-207ENST00000588738 SPRYD3Q8NCJ5 442 aa20.93■□□□□ 0.94
ERCC1-207ENST00000588738 NLRP4Q96MN2 994 aa20.93■□□□□ 0.94
ERCC1-207ENST00000588738 KIAA1024Q9UPX6 916 aa20.93■□□□□ 0.94
ERCC1-207ENST00000588738 TTC3P53804 2025 aa20.93■□□□□ 0.94
ERCC1-207ENST00000588738 ARHGEF35A5YM69 484 aa20.92■□□□□ 0.94
ERCC1-207ENST00000588738 CDC25AP30304 524 aa20.92■□□□□ 0.94
ERCC1-207ENST00000588738 HTRA4P83105 476 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-207ENST00000588738 LAMTOR4Q0VGL1 99 aa20.92■□□□□ 0.94
ERCC1-207ENST00000588738 ECM1Q16610 540 aa20.92■□□□□ 0.94
ERCC1-207ENST00000588738 LINC01599Q8WXQ3 324 aa20.92■□□□□ 0.94
ERCC1-207ENST00000588738 ADAM2Q99965 735 aa20.92■□□□□ 0.94
ERCC1-207ENST00000588738 XPNPEP1Q9NQW7 623 aa20.92■□□□□ 0.94
ERCC1-207ENST00000588738 DDX19AQ9NUU7 478 aaKnown RBP20.92■□□□□ 0.94
ERCC1-207ENST00000588738 RNF216Q9NWF9 866 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-207ENST00000588738 USO1O60763 962 aaKnown RBP20.91■□□□□ 0.94
ERCC1-207ENST00000588738 SRGAP2CP0DJJ0 459 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 ZSCAN20P17040 1043 aaPredicted RBP20.91■□□□□ 0.94
ERCC1-207ENST00000588738 FAM173BQ6P4H8 233 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 MCPH1Q8NEM0 835 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 AK8Q96MA6 479 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 YME1L1Q96TA2 773 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 MMTAG2Q9BU76 263 aaKnown RBP20.91■□□□□ 0.94
ERCC1-207ENST00000588738 RGS18Q9NS28 235 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 C1orf112Q9NSG2 853 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 DNM3Q9UQ16 869 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 CLIC4Q9Y696 253 aa20.91■□□□□ 0.94
ERCC1-207ENST00000588738 MGEA5O60502 916 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 CSDE1O75534 798 aaKnown RBP20.9■□□□□ 0.94
ERCC1-207ENST00000588738 STAG3L1P0CL83 205 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 SFPQP23246 707 aaKnown RBP eCLIP20.9■□□□□ 0.94
ERCC1-207ENST00000588738 TAP1Q03518 808 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 GRIN2CQ14957 1233 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 PADI6Q6TGC4 694 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 SLC24A5Q71RS6 500 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 GUCD1Q96NT3 240 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 CDX2Q99626 313 aaPredicted RBP20.9■□□□□ 0.94
ERCC1-207ENST00000588738 BHMT2Q9H2M3 363 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 IFT122Q9HBG6 1241 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 LRFN2Q9ULH4 789 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 MYH15Q9Y2K3 1946 aa20.9■□□□□ 0.94
ERCC1-207ENST00000588738 LCHNA4D1U4 455 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 FGFR4P22455 802 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 ARL2P36404 184 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 LONP1P36776 959 aaKnown RBP20.89■□□□□ 0.93
ERCC1-207ENST00000588738 SARSP49591 514 aaKnown RBP20.89■□□□□ 0.93
ERCC1-207ENST00000588738 TFDP1Q14186 410 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
ERCC1-207ENST00000588738 SRGAP1Q7Z6B7 1085 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 NPAS4Q8IUM7 802 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 KCTD17Q8N5Z5 321 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 RNF149Q8NC42 400 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 CDK5RAP3Q96JB5 506 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 NT5C3AQ9H0P0 336 aa20.89■□□□□ 0.93
ERCC1-207ENST00000588738 EYA4O95677 639 aa20.88■□□□□ 0.93
ERCC1-207ENST00000588738 CYP11B2P19099 503 aa20.88■□□□□ 0.93
ERCC1-207ENST00000588738 UBA7P41226 1012 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms